Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RPS29P7-201ENST00000439662 171 ntBASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 AC008267.6-201ENST00000441664 139 ntBASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 AC020593.1-201ENST00000507399 299 ntBASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 HMGB3P3-201ENST00000510526 400 ntBASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 RNU6-58P-201ENST00000517143 103 ntBASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 ZNF192P1-203ENST00000565888 810 ntBASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 MIR3684-201ENST00000579779 74 ntBASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 MIR4644-201ENST00000579929 84 ntBASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 AC022441.3-201ENST00000605737 136 ntBASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 AL365222.1-201ENST00000614661 98 ntBASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 snoU18.1-201ENST00000629629 71 ntBASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SSBP3Q9BWW4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 RNU5B-2P-201ENST00000363036 113 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 RNA5SP97-201ENST00000365006 84 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 RNU6-1181P-201ENST00000384191 106 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 U8.10-201ENST00000384260 133 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 SNORA37-201ENST00000384504 129 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 RNU6-658P-201ENST00000384606 106 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 MIR1183-201ENST00000408856 89 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 AL358075.3-201ENST00000426289 226 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 FTH1P6-201ENST00000430768 320 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 AL645939.1-201ENST00000453429 797 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 RPS4XP22-201ENST00000480755 780 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 AC005840.1-201ENST00000498412 377 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 RNA5SP179-201ENST00000517284 121 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 CYCSP39-201ENST00000565821 309 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 RN7SL703P-201ENST00000578485 302 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 AC136601.2-201ENST00000604356 474 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 AL109809.4-201ENST00000603520 2185 ntBASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSBP3Q9BWW4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 FTLP6-201ENST00000355274 422 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 Y_RNA.23-201ENST00000362496 106 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 Y_RNA.238-201ENST00000364441 102 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 SNORD32A-201ENST00000364805 84 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 MIR186-201ENST00000384988 86 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 AL138878.1-201ENST00000405131 347 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 RN7SKP202-201ENST00000410439 330 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 AL512844.2-201ENST00000433990 593 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 Z82210.1-201ENST00000440037 231 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 GPM6BP3-201ENST00000442797 145 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 AC009237.8-201ENST00000445492 379 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 SNORD108-201ENST00000459332 71 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 SNRPGP7-201ENST00000469016 106 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 PPIAP15-201ENST00000479662 484 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 RNU6-1183P-201ENST00000517054 60 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 CYCSP23-201ENST00000519781 313 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 TGIF1P1-201ENST00000558095 802 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 AC091167.4-201ENST00000605079 184 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 AL591424.2-201ENST00000617023 128 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 AC092593.1-201ENST00000515413 1815 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 AC008568.2-201ENST00000623862 2313 ntBASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSBP3Q9BWW4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 227.9 ms