Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC114801.2-201ENST00000503825 781 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.02□□□□□ -2.25
UPK3BQ9BT76 RNU1-86P-201ENST00000516108 154 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 Y_RNA.675-201ENST00000516389 149 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 RNU1-107P-201ENST00000516617 154 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.02□□□□□ -2.25
UPK3BQ9BT76 COPS8P3-201ENST00000526024 482 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 AC115990.1-201ENST00000526957 301 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 AP003181.2-201ENST00000528941 181 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 AL161670.1-201ENST00000554348 137 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 PCMTD1P2-201ENST00000565017 355 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 MIR3169-201ENST00000578032 83 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 MIR4422-201ENST00000581938 83 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 AC008521.1-201ENST00000587471 187 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.02□□□□□ -2.25
UPK3BQ9BT76 PRR13P7-201ENST00000605538 430 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.02□□□□□ -2.25
UPK3BQ9BT76 RNU6-78P-201ENST00000362897 107 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 RNU6-501P-201ENST00000364072 100 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 RNU6-439P-201ENST00000384188 106 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 MIR558-201ENST00000384920 94 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 MIR320A-201ENST00000385302 82 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 RNU6-1176P-201ENST00000390955 107 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 MTCYBP36-201ENST00000404146 440 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 Y_RNA.608-201ENST00000410647 95 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AL008987.1-201ENST00000415528 237 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 BTF3P4-201ENST00000418852 495 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 MTND4P20-201ENST00000424125 869 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AC007283.2-201ENST00000424739 197 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 KATNBL1P3-201ENST00000443475 909 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AC009474.2-201ENST00000451383 136 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 RN7SKP210-201ENST00000459176 261 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AL163540.1-201ENST00000485382 386 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AC132942.1-201ENST00000486753 483 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 MTCYBP35-201ENST00000503630 1137 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 RBBP4P6-201ENST00000508098 202 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AC025465.3-201ENST00000510570 311 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AC108729.3-201ENST00000513484 108 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 RNU5F-2P-201ENST00000516066 82 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 SNORA31.17-201ENST00000516953 127 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 RNA5SP490-201ENST00000517141 136 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.01□□□□□ -2.25
UPK3BQ9BT76 MTND2P7-201ENST00000521337 640 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AC008269.2-201ENST00000561915 1105 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.01□□□□□ -2.25
UPK3BQ9BT76 SUB1P4-201ENST00000566062 339 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AC002400.1-201ENST00000569310 726 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AC005786.1-201ENST00000588553 154 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
UPK3BQ9BT76 VN1R80P-201ENST00000597126 338 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AL645939.4-201ENST00000604495 135 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AP001485.1-201ENST00000604799 199 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AC018714.1-201ENST00000605028 208 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AC105129.3-201ENST00000605455 485 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AL590240.4-201ENST00000616908 390 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 ZNF209P-201ENST00000593450 2304 ntBASIC1.01□□□□□ -2.25
UPK3BQ9BT76 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
UPK3BQ9BT76 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1□□□□□ -2.25
UPK3BQ9BT76 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1□□□□□ -2.25
UPK3BQ9BT76 U8.1-201ENST00000362843 134 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 RNU4-1-201ENST00000363925 141 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 SNORD114-6-201ENST00000364393 72 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 MIR1323-201ENST00000408090 73 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 MIR1304-201ENST00000408243 91 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 Y_RNA.595-201ENST00000410403 105 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 RNU6-174P-201ENST00000410406 106 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 RNU6-1245P-201ENST00000411130 106 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1□□□□□ -2.25
UPK3BQ9BT76 AC106883.1-201ENST00000418805 562 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1□□□□□ -2.25
UPK3BQ9BT76 AL589872.1-201ENST00000426602 288 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 AL354695.1-201ENST00000427935 228 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 AC092473.1-201ENST00000441098 221 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 HMGN2P18-201ENST00000450680 270 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 DUXAP8-207ENST00000456786 622 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1□□□□□ -2.25
UPK3BQ9BT76 RNU7-95P-201ENST00000459222 64 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 AC005908.1-201ENST00000468701 347 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1□□□□□ -2.25
UPK3BQ9BT76 AC010409.1-201ENST00000487382 476 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 AC098862.1-201ENST00000504991 413 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 HMGN1P13-201ENST00000505795 138 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1□□□□□ -2.25
UPK3BQ9BT76 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1□□□□□ -2.25
UPK3BQ9BT76 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1□□□□□ -2.25
UPK3BQ9BT76 AC015720.1-201ENST00000565251 277 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1□□□□□ -2.25
UPK3BQ9BT76 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
UPK3BQ9BT76 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
UPK3BQ9BT76 RNU4-13P-201ENST00000364019 141 ntBASIC0.99□□□□□ -2.25
UPK3BQ9BT76 RNY1P12-201ENST00000364251 105 ntBASIC0.99□□□□□ -2.25
UPK3BQ9BT76 Y_RNA.338-201ENST00000365320 114 ntBASIC0.99□□□□□ -2.25
UPK3BQ9BT76 RNU6-61P-201ENST00000365528 109 ntBASIC0.99□□□□□ -2.25
UPK3BQ9BT76 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.99□□□□□ -2.25
UPK3BQ9BT76 FGF7P8-201ENST00000402994 292 ntBASIC0.99□□□□□ -2.25
UPK3BQ9BT76 MTCO2P8-201ENST00000412213 658 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms