Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.32□□□□□ -1.72
ZKSCAN3Q9BRR0 SNORD116-28-201ENST00000516123 91 ntBASIC4.32□□□□□ -1.72
ZKSCAN3Q9BRR0 SNORA70.18-201ENST00000516696 98 ntBASIC4.32□□□□□ -1.72
ZKSCAN3Q9BRR0 RNU6-567P-201ENST00000516746 107 ntBASIC4.32□□□□□ -1.72
ZKSCAN3Q9BRR0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.32□□□□□ -1.72
ZKSCAN3Q9BRR0 CR383656.8-201ENST00000549046 145 ntBASIC4.32□□□□□ -1.72
ZKSCAN3Q9BRR0 MIR5571-201ENST00000577998 113 ntBASIC4.32□□□□□ -1.72
ZKSCAN3Q9BRR0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ZKSCAN3Q9BRR0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.32□□□□□ -1.72
ZKSCAN3Q9BRR0 AL034408.1-202ENST00000636088 415 ntBASIC4.32□□□□□ -1.72
ZKSCAN3Q9BRR0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
ZKSCAN3Q9BRR0 AC007656.2-201ENST00000624902 4547 ntBASIC4.32□□□□□ -1.72
ZKSCAN3Q9BRR0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZKSCAN3Q9BRR0 AL079305.1-201ENST00000623159 3008 ntBASIC4.32□□□□□ -1.72
ZKSCAN3Q9BRR0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 Y_RNA.82-201ENST00000363000 102 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 Y_RNA.92-201ENST00000363043 102 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 RNU6-626P-201ENST00000363354 107 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 Y_RNA.230-201ENST00000364348 109 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 Y_RNA.235-201ENST00000364412 102 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 Y_RNA.306-201ENST00000365015 102 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 RNU1-140P-201ENST00000365040 165 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 Y_RNA.312-201ENST00000365089 102 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 Y_RNA.322-201ENST00000365151 102 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 RNU1-100P-201ENST00000365255 165 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 Y_RNA.570-201ENST00000384750 101 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 SNORA48.7-201ENST00000391302 135 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 RPL23AP48-201ENST00000406913 488 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 RNU6-1001P-201ENST00000411265 100 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 AC074117.2-201ENST00000417130 397 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 WARS2P1-201ENST00000429678 537 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 AC007969.2-201ENST00000441891 191 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 TMSB4XP3-201ENST00000445144 114 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 AC125238.1-201ENST00000448842 249 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 HMGB3P8-201ENST00000449709 577 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 AL645939.1-201ENST00000453429 797 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 Y_RNA.650-201ENST00000459002 102 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 AC016632.1-201ENST00000503994 196 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 Y_RNA.777-201ENST00000516982 102 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 MIR4429-201ENST00000580105 73 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 MIR4282-201ENST00000583613 67 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 Y_RNA.771-201ENST00000598668 102 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 AC012468.1-201ENST00000604888 430 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 Y_RNA.789-201ENST00000622480 102 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 AC073073.2-201ENST00000609827 2578 ntBASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
ZKSCAN3Q9BRR0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 UBE2WP1-201ENST00000362030 340 ntBASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 MIR888-201ENST00000401186 77 ntBASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 RPL19P1-201ENST00000411635 428 ntBASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 MTATP6P29-201ENST00000415057 132 ntBASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 DBIP2-201ENST00000419076 262 ntBASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 GPM6BP3-201ENST00000442797 145 ntBASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 RNU6-1278P-201ENST00000516130 107 ntBASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 RNU6-58P-201ENST00000517143 103 ntBASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 UBL5P4-201ENST00000562584 236 ntBASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 MIR3922-201ENST00000585192 84 ntBASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 AC034229.5-201ENST00000624258 185 ntBASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 AP000553.6-201ENST00000641242 118 ntBASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZKSCAN3Q9BRR0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 MIR410-201ENST00000362222 80 ntBASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 RNU6-1159P-201ENST00000362933 107 ntBASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 SNORD115-8-201ENST00000363856 82 ntBASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 RNU6-1141P-201ENST00000364520 107 ntBASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 SNORD115-38-201ENST00000365037 82 ntBASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 RNU6-47P-201ENST00000383866 107 ntBASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 RNU6-20P-201ENST00000384106 107 ntBASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 RNU6-1145P-201ENST00000384246 107 ntBASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 MIR329-1-201ENST00000385028 80 ntBASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 SNORA46.1-201ENST00000391069 153 ntBASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 AC007395.1-201ENST00000451333 677 ntBASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 Y_RNA.662-201ENST00000516028 97 ntBASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 HSPE1P4-201ENST00000550617 308 ntBASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.29□□□□□ -1.72
ZKSCAN3Q9BRR0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms