Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 RPL23AP50-201ENST00000434149 455 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 OSTCP8-201ENST00000445117 448 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 HMGN1P13-201ENST00000505795 138 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 AC010265.1-201ENST00000513509 211 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 Y_RNA.670-201ENST00000516255 105 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 HPRT1P3-201ENST00000539521 576 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 AC109446.1-201ENST00000566172 220 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 VN1R107P-201ENST00000601784 209 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 AL391813.1-201ENST00000603098 260 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 AC009229.3-201ENST00000608056 282 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 AC022140.2-201ENST00000623500 188 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 SNORA50A-202ENST00000629536 136 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 AC241585.2-209ENST00000638217 143 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 KPNA2P1-201ENST00000458289 1591 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 AC006026.1-201ENST00000444025 1803 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 RNU6-805P-201ENST00000365643 106 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 MIR544A-201ENST00000384855 91 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 MIR512-1-201ENST00000384913 84 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 RNY4P36-201ENST00000391116 96 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 AL356057.3-201ENST00000402607 340 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 RNA5SP293-201ENST00000410527 113 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 AL358075.3-201ENST00000426289 226 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 FTH1P25-201ENST00000447665 469 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 SNORD5.1-201ENST00000458800 75 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 RPS29P12-201ENST00000460178 152 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 RPL7P42-201ENST00000481005 679 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 AC026782.1-201ENST00000512952 449 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 Y_RNA.718-201ENST00000517110 102 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 AC245166.1-201ENST00000521012 253 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 AC105137.2-201ENST00000569073 466 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 CPDP1-201ENST00000579660 283 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 AL669831.3-213ENST00000636676 183 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 AC091564.4-201ENST00000533934 2194 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 HAUS6P2-201ENST00000433254 2404 ntBASIC2.97□□□□□ -1.93
PAAF1Q9BRP4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AC093831.2-201ENST00000624393 3427 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AC009487.2-201ENST00000420969 6821 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 RNU6-227P-201ENST00000362865 103 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 RNU6-1059P-201ENST00000363752 98 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 RNU6-1188P-201ENST00000363795 107 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 Y_RNA.419-201ENST00000384041 102 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 RNU6-692P-201ENST00000384496 107 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 MIR181A2-201ENST00000384863 110 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 RPL21P3-201ENST00000395517 478 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 RN7SKP58-201ENST00000411010 305 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 ARL5AP4-201ENST00000430731 512 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AL133396.1-201ENST00000432048 687 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AC243964.1-201ENST00000441814 261 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AC146507.2-201ENST00000460608 476 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AC003982.1-202ENST00000469928 248 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 RPL30P12-201ENST00000474666 353 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 PTP4A1P4-201ENST00000512479 322 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 MRPS36P2-201ENST00000512569 299 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 RNU5B-3P-201ENST00000516601 115 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 RNU6-1213P-201ENST00000517075 94 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 SNORA31.23-201ENST00000517219 133 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AC068657.1-201ENST00000520807 306 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AL133393.1-201ENST00000603277 287 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AP000654.2-201ENST00000605633 586 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AL627309.6-201ENST00000606857 840 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AC096772.1-201ENST00000609146 564 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 MIR8076-201ENST00000611401 83 ntBASIC2.96□□□□□ -1.94
PAAF1Q9BRP4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms