Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RTP3Q9BQQ7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RTP3Q9BQQ7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RTP3Q9BQQ7 MTND4P12-201ENST00000498999 1377 ntBASIC2.6□□□□□ -1.99
RTP3Q9BQQ7 CDC27P3-201ENST00000635418 1910 ntBASIC2.6□□□□□ -1.99
RTP3Q9BQQ7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
RTP3Q9BQQ7 AC002543.1-201ENST00000299783 1954 ntBASIC2.6□□□□□ -1.99
RTP3Q9BQQ7 AC016717.2-201ENST00000609089 5141 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 ADAM3A-203ENST00000461344 2157 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 RNU6-72P-201ENST00000384285 79 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 Y_RNA.530-201ENST00000384587 101 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 RNU2-49P-201ENST00000410666 184 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 AC009414.1-201ENST00000427200 443 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 RPL31P41-201ENST00000477967 372 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 AC046134.1-201ENST00000514454 666 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 RNU6-581P-201ENST00000516214 105 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 RNU6-875P-201ENST00000516488 106 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 RNU6-1069P-201ENST00000516612 133 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 CYCSP27-201ENST00000527643 293 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 AC025281.1-201ENST00000567026 265 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 AC005261.5-201ENST00000596280 355 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 RPL23AP88-201ENST00000605759 454 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 AC103810.6-201ENST00000606708 136 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 AC009994.1-201ENST00000606889 253 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 AC046143.2-201ENST00000609789 160 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 AC010378.1-201ENST00000619270 362 ntBASIC2.59□□□□□ -1.99
RTP3Q9BQQ7 AC080128.1-201ENST00000474389 1917 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 RNU6-254P-201ENST00000363377 107 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 SNORD114-30-201ENST00000364448 72 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 Y_RNA.414-201ENST00000384011 101 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 U3.37-201ENST00000408528 213 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 MTCO3P46-201ENST00000425787 232 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 NDUFA5P4-201ENST00000436704 385 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 AC092001.1-201ENST00000453012 261 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 AC233279.1-201ENST00000455300 423 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 RNU7-66P-201ENST00000459469 62 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 AC079140.5-201ENST00000507882 310 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 AC234781.5-201ENST00000508429 271 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 SNORA19.2-201ENST00000516013 114 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 Y_RNA.687-201ENST00000516558 91 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 AC087241.2-201ENST00000535801 324 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 ELOCP31-201ENST00000540463 467 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 AL121821.2-201ENST00000556081 394 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 AC103810.1-201ENST00000579873 453 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 MIR5692C1-201ENST00000585309 91 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 AL355877.2-201ENST00000603670 358 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 APOOP1-201ENST00000604695 592 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 AC021646.1-201ENST00000605469 484 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 AL357078.3-201ENST00000607528 618 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 Z69720.2-201ENST00000624755 279 ntBASIC2.58□□□□□ -2
RTP3Q9BQQ7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.58□□□□□ -2
RTP3Q9BQQ7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.58□□□□□ -2
RTP3Q9BQQ7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RTP3Q9BQQ7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.57□□□□□ -2
RTP3Q9BQQ7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
RTP3Q9BQQ7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.57□□□□□ -2
RTP3Q9BQQ7 SNORD113-7-201ENST00000363762 77 ntBASIC2.57□□□□□ -2
RTP3Q9BQQ7 SNORA25.6-201ENST00000364121 118 ntBASIC2.57□□□□□ -2
RTP3Q9BQQ7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
RTP3Q9BQQ7 MIR450B-201ENST00000401182 78 ntBASIC2.57□□□□□ -2
RTP3Q9BQQ7 MTND3P8-201ENST00000412909 339 ntBASIC2.57□□□□□ -2
RTP3Q9BQQ7 PDCL2P1-201ENST00000419302 352 ntBASIC2.57□□□□□ -2
RTP3Q9BQQ7 RPS12P2-201ENST00000439728 269 ntBASIC2.57□□□□□ -2
RTP3Q9BQQ7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.57□□□□□ -2
RTP3Q9BQQ7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.57□□□□□ -2
RTP3Q9BQQ7 RNU6-329P-201ENST00000459618 107 ntBASIC2.57□□□□□ -2
RTP3Q9BQQ7 AC116655.1-201ENST00000508324 901 ntBASIC2.57□□□□□ -2
RTP3Q9BQQ7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.57□□□□□ -2
RTP3Q9BQQ7 RNU7-30P-201ENST00000516835 62 ntBASIC2.57□□□□□ -2
RTP3Q9BQQ7 SNORA31.18-201ENST00000517043 134 ntBASIC2.57□□□□□ -2
RTP3Q9BQQ7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.57□□□□□ -2
RTP3Q9BQQ7 SCOCP1-201ENST00000554676 349 ntBASIC2.57□□□□□ -2
RTP3Q9BQQ7 AC026464.5-201ENST00000562497 722 ntBASIC2.57□□□□□ -2
RTP3Q9BQQ7 MIR4742-201ENST00000581069 85 ntBASIC2.57□□□□□ -2
RTP3Q9BQQ7 AC123912.5-201ENST00000605470 343 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms