Protein–RNA interactions for Protein: Q99966

CITED1, Cbp/p300-interacting transactivator 1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1Q99966 RNU6-903P-201ENST00000391270 109 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 AL451074.3-201ENST00000437709 472 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.88□□□□□ -2.11
CITED1Q99966 AL031659.1-201ENST00000447075 539 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 RPL39P29-201ENST00000447779 157 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.88□□□□□ -2.11
CITED1Q99966 CACYBPP2-201ENST00000453625 678 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 PMCHL2-203ENST00000457791 237 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.88□□□□□ -2.11
CITED1Q99966 AC090255.1-201ENST00000495779 349 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.88□□□□□ -2.11
CITED1Q99966 RNU2-69P-201ENST00000516061 100 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 RNA5SP281-201ENST00000516504 135 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 RN7SKP219-201ENST00000516825 296 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.88□□□□□ -2.11
CITED1Q99966 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.88□□□□□ -2.11
CITED1Q99966 IMMP1LP2-201ENST00000552954 492 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 MTATP6P3-201ENST00000581686 676 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 AC004223.2-201ENST00000590309 544 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 SNRPGP17-201ENST00000603780 214 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 AC025754.2-201ENST00000606491 432 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 AC022202.1-201ENST00000613515 211 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 AL354950.2-201ENST00000617939 290 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 MIR1291-201ENST00000627649 87 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 U4.7-201ENST00000638126 106 ntBASIC1.88□□□□□ -2.11
CITED1Q99966 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CITED1Q99966 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.87□□□□□ -2.11
CITED1Q99966 Y_RNA.1-201ENST00000352915 104 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 RNU6-552P-201ENST00000362869 119 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 RNU6-996P-201ENST00000365438 107 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 RNU6-1103P-201ENST00000384150 107 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 RNU6-517P-201ENST00000384362 110 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 SNORA51.11-201ENST00000384442 131 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 MIR544A-201ENST00000384855 91 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 Y_RNA.582-201ENST00000391023 95 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 DEFB108C-201ENST00000400154 252 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.87□□□□□ -2.11
CITED1Q99966 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.87□□□□□ -2.11
CITED1Q99966 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.87□□□□□ -2.11
CITED1Q99966 MTCYBP8-201ENST00000422855 651 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.87□□□□□ -2.11
CITED1Q99966 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.87□□□□□ -2.11
CITED1Q99966 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.87□□□□□ -2.11
CITED1Q99966 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.87□□□□□ -2.11
CITED1Q99966 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.87□□□□□ -2.11
CITED1Q99966 AL121594.1-201ENST00000475906 575 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 AC079804.2-201ENST00000490376 200 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 CKS1BP7-201ENST00000522230 235 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 AP005435.4-201ENST00000529514 284 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 AC026464.5-201ENST00000562497 722 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 MIR5092-201ENST00000583139 88 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 AL078605.1-201ENST00000603529 500 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 AC012507.3-201ENST00000603556 477 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 AC091805.2-201ENST00000603848 235 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 AC046143.2-201ENST00000609789 160 ntBASIC1.87□□□□□ -2.11
CITED1Q99966 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.87□□□□□ -2.11
CITED1Q99966 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CITED1Q99966 Y_RNA.40-201ENST00000362645 93 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 SNORA16.2-201ENST00000390991 127 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 AC068050.1-201ENST00000394891 380 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 SRIP2-201ENST00000428470 166 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 AL603825.1-201ENST00000438481 80 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 USP9YP8-201ENST00000441913 500 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.86□□□□□ -2.11
CITED1Q99966 HMGB1P29-201ENST00000505659 499 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.86□□□□□ -2.11
CITED1Q99966 RNU6-991P-201ENST00000516168 107 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CITED1Q99966 AP003392.2-201ENST00000527269 208 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 AL137161.1-201ENST00000532231 390 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.86□□□□□ -2.11
CITED1Q99966 AC023050.3-201ENST00000541142 333 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.86□□□□□ -2.11
CITED1Q99966 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.86□□□□□ -2.11
CITED1Q99966 PIGPP4-201ENST00000584447 307 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 APOOP1-201ENST00000604695 592 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
CITED1Q99966 AC005296.1-201ENST00000616145 209 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.86□□□□□ -2.11
CITED1Q99966 AC009509.4-201ENST00000619202 509 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 AC098657.3-201ENST00000620434 263 ntBASIC1.86□□□□□ -2.11
CITED1Q99966 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.86□□□□□ -2.11
CITED1Q99966 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.86□□□□□ -2.11
CITED1Q99966 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CITED1Q99966 ZNF72P-201ENST00000425869 1908 ntBASIC1.85□□□□□ -2.11
CITED1Q99966 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CITED1Q99966 AL079342.1-201ENST00000401460 267 ntBASIC1.85□□□□□ -2.11
CITED1Q99966 CBX3P9-201ENST00000402326 552 ntBASIC1.85□□□□□ -2.11
CITED1Q99966 RNU4-55P-201ENST00000410731 137 ntBASIC1.85□□□□□ -2.11
CITED1Q99966 RNU6-293P-201ENST00000411259 106 ntBASIC1.85□□□□□ -2.11
CITED1Q99966 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CITED1Q99966 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CITED1Q99966 HMGB1P18-201ENST00000438801 619 ntBASIC1.85□□□□□ -2.11
CITED1Q99966 AC007969.2-201ENST00000441891 191 ntBASIC1.85□□□□□ -2.11
CITED1Q99966 AL137159.1-201ENST00000452808 512 ntBASIC1.85□□□□□ -2.11
CITED1Q99966 snoU13.14-201ENST00000459372 104 ntBASIC1.85□□□□□ -2.11
CITED1Q99966 AL163973.1-201ENST00000484753 577 ntBASIC1.85□□□□□ -2.11
CITED1Q99966 RPL9P6-201ENST00000492764 598 ntBASIC1.85□□□□□ -2.11
CITED1Q99966 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.85□□□□□ -2.11
CITED1Q99966 MTND2P33-201ENST00000506452 1031 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms