Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AL513302.2-201ENST00000562313 1842 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TIMP4Q99727 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TIMP4Q99727 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
TIMP4Q99727 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
TIMP4Q99727 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
TIMP4Q99727 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.11□□□□□ -1.91
TIMP4Q99727 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
TIMP4Q99727 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
TIMP4Q99727 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TIMP4Q99727 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
TIMP4Q99727 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.1□□□□□ -1.91
TIMP4Q99727 FTLP6-201ENST00000355274 422 ntBASIC3.1□□□□□ -1.91
TIMP4Q99727 RNU1-76P-201ENST00000362903 159 ntBASIC3.1□□□□□ -1.91
TIMP4Q99727 RNU6-527P-201ENST00000363425 104 ntBASIC3.1□□□□□ -1.91
TIMP4Q99727 RNU6-658P-201ENST00000384606 106 ntBASIC3.1□□□□□ -1.91
TIMP4Q99727 RNU6-1197P-201ENST00000391183 107 ntBASIC3.1□□□□□ -1.91
TIMP4Q99727 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TIMP4Q99727 RNA5SP293-201ENST00000410527 113 ntBASIC3.1□□□□□ -1.91
TIMP4Q99727 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.1□□□□□ -1.91
TIMP4Q99727 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.1□□□□□ -1.91
TIMP4Q99727 AL512844.2-201ENST00000433990 593 ntBASIC3.1□□□□□ -1.91
TIMP4Q99727 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.1□□□□□ -1.91
TIMP4Q99727 RPL39P38-201ENST00000467018 153 ntBASIC3.1□□□□□ -1.91
TIMP4Q99727 TRBVB-201ENST00000477100 408 ntBASIC3.1□□□□□ -1.91
TIMP4Q99727 AC093663.1-201ENST00000497190 394 ntBASIC3.1□□□□□ -1.91
TIMP4Q99727 FCF1P8-201ENST00000510322 597 ntBASIC3.1□□□□□ -1.91
TIMP4Q99727 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.1□□□□□ -1.91
TIMP4Q99727 SNORA31.18-201ENST00000517043 134 ntBASIC3.1□□□□□ -1.91
TIMP4Q99727 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.1□□□□□ -1.91
TIMP4Q99727 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.1□□□□□ -1.91
TIMP4Q99727 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.1□□□□□ -1.91
TIMP4Q99727 AL355877.2-201ENST00000603670 358 ntBASIC3.1□□□□□ -1.91
TIMP4Q99727 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
TIMP4Q99727 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.1□□□□□ -1.91
TIMP4Q99727 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.1□□□□□ -1.91
TIMP4Q99727 AC007496.3-201ENST00000624987 3443 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.09□□□□□ -1.91
TIMP4Q99727 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
TIMP4Q99727 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TIMP4Q99727 RNA5SP295-201ENST00000362655 121 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 Y_RNA.183-201ENST00000363882 113 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 U3.13-201ENST00000364804 214 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 BTF3L4P2-201ENST00000392798 346 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 RNU6-121P-201ENST00000410525 99 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 RNA5SP120-201ENST00000410900 112 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TIMP4Q99727 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.09□□□□□ -1.91
TIMP4Q99727 RPL23AP83-201ENST00000434984 473 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 RPL23AP22-201ENST00000437556 453 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 MTND4LP30-201ENST00000454092 297 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.09□□□□□ -1.91
TIMP4Q99727 RPL21P104-201ENST00000464143 478 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 TOMM22P6-201ENST00000465035 409 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 RPL23AP49-201ENST00000492925 468 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 AC010469.2-201ENST00000496412 480 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 HMGB3P17-201ENST00000504195 649 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 RNU7-175P-201ENST00000515915 61 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 SNORA70.19-201ENST00000516717 90 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 Y_RNA.706-201ENST00000516933 99 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 RNU6-1183P-201ENST00000517054 60 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 SNORA70.24-201ENST00000517233 118 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 CYCSP39-201ENST00000565821 309 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 AC020895.1-201ENST00000595362 272 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.09□□□□□ -1.91
TIMP4Q99727 MIR8058-201ENST00000615737 89 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.09□□□□□ -1.91
TIMP4Q99727 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.09□□□□□ -1.91
TIMP4Q99727 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
TIMP4Q99727 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.09□□□□□ -1.92
TIMP4Q99727 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
TIMP4Q99727 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
TIMP4Q99727 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
TIMP4Q99727 AC009541.1-201ENST00000438279 2662 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.08□□□□□ -1.92
TIMP4Q99727 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TIMP4Q99727 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TIMP4Q99727 RNU6-898P-201ENST00000365627 104 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
TIMP4Q99727 SNORA9-201ENST00000384215 133 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 Y_RNA.458-201ENST00000384240 102 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 RNU6-611P-201ENST00000384276 104 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 RNU6-1093P-201ENST00000391194 107 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 RPS29P13-201ENST00000402041 169 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 MTCYBP2-201ENST00000407745 171 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 AC092047.1-201ENST00000424997 240 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 AC005300.1-201ENST00000428401 373 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 AC005326.1-201ENST00000429197 123 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.08□□□□□ -1.92
TIMP4Q99727 Z82188.1-201ENST00000436709 154 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.08□□□□□ -1.92
TIMP4Q99727 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.08□□□□□ -1.92
TIMP4Q99727 BX510359.1-201ENST00000456973 237 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 U8.22-201ENST00000459141 133 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 RN7SL330P-201ENST00000469709 307 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 RN7SL807P-201ENST00000470923 297 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 RPS4XP22-201ENST00000480755 780 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 RNU1-103P-201ENST00000516502 125 ntBASIC3.08□□□□□ -1.92
TIMP4Q99727 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms