Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AL121992.2-201ENST00000606262 256 ntBASIC-0.3□□□□□ -2.46
SPENQ96T58 AP005229.2-201ENST00000609980 697 ntBASIC-0.3□□□□□ -2.46
SPENQ96T58 RNU6-877P-201ENST00000383868 107 ntBASIC-0.3□□□□□ -2.46
SPENQ96T58 RNU6-439P-201ENST00000384188 106 ntBASIC-0.3□□□□□ -2.46
SPENQ96T58 AL049545.1-201ENST00000401856 572 ntBASIC-0.3□□□□□ -2.46
SPENQ96T58 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.3□□□□□ -2.46
SPENQ96T58 CYB5AP5-201ENST00000549779 389 ntBASIC-0.3□□□□□ -2.46
SPENQ96T58 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC-0.3□□□□□ -2.46
SPENQ96T58 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.3□□□□□ -2.46
SPENQ96T58 AC009233.1-201ENST00000616477 371 ntBASIC-0.3□□□□□ -2.46
SPENQ96T58 MIR8063-201ENST00000621930 81 ntBASIC-0.3□□□□□ -2.46
SPENQ96T58 MIR196A2-201ENST00000385189 110 ntBASIC-0.31□□□□□ -2.46
SPENQ96T58 U7.7-201ENST00000459276 60 ntBASIC-0.31□□□□□ -2.46
SPENQ96T58 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.31□□□□□ -2.46
SPENQ96T58 AC055876.5-201ENST00000605667 259 ntBASIC-0.31□□□□□ -2.46
SPENQ96T58 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.31□□□□□ -2.46
SPENQ96T58 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC-0.31□□□□□ -2.46
SPENQ96T58 RNU1-39P-201ENST00000383897 165 ntBASIC-0.31□□□□□ -2.46
SPENQ96T58 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.31□□□□□ -2.46
SPENQ96T58 AL512844.2-201ENST00000433990 593 ntBASIC-0.31□□□□□ -2.46
SPENQ96T58 NANOGP2-201ENST00000435391 727 ntBASIC-0.31□□□□□ -2.46
SPENQ96T58 AP001328.1-201ENST00000528550 176 ntBASIC-0.31□□□□□ -2.46
SPENQ96T58 AC004908.3-201ENST00000610248 625 ntBASIC-0.31□□□□□ -2.46
SPENQ96T58 AL031313.1-201ENST00000448435 256 ntBASIC-0.31□□□□□ -2.46
SPENQ96T58 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.31□□□□□ -2.46
SPENQ96T58 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.31□□□□□ -2.46
SPENQ96T58 AC025627.3-201ENST00000582078 182 ntBASIC-0.31□□□□□ -2.46
SPENQ96T58 AC013468.1-201ENST00000608680 598 ntBASIC-0.31□□□□□ -2.46
SPENQ96T58 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.31□□□□□ -2.46
SPENQ96T58 RNU6-1331P-201ENST00000363658 106 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 RNA5SP56-201ENST00000410277 118 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.32□□□□□ -2.46
SPENQ96T58 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.32□□□□□ -2.46
SPENQ96T58 BUD31P2-201ENST00000449374 300 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.32□□□□□ -2.46
SPENQ96T58 AC040896.1-201ENST00000613819 479 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 AC004009.2-201ENST00000623016 728 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 AC092268.1-201ENST00000342691 405 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 RNU6-657P-201ENST00000383904 107 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 BRK1P2-201ENST00000442875 223 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC-0.32□□□□□ -2.46
SPENQ96T58 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.32□□□□□ -2.46
SPENQ96T58 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC-0.32□□□□□ -2.46
SPENQ96T58 AC048346.1-201ENST00000510247 144 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 SNORD19.2-201ENST00000516978 73 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 AP003066.2-201ENST00000529375 555 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 AC025423.2-201ENST00000537570 439 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 AP000403.1-201ENST00000603349 851 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 AC008759.3-201ENST00000613300 508 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
SPENQ96T58 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.32□□□□□ -2.46
SPENQ96T58 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 GTF2IP3-201ENST00000433887 494 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 AL441985.1-201ENST00000457727 251 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.32□□□□□ -2.46
SPENQ96T58 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.32□□□□□ -2.46
SPENQ96T58 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.32□□□□□ -2.46
SPENQ96T58 AP003465.2-201ENST00000602571 373 ntBASIC-0.32□□□□□ -2.46
SPENQ96T58 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
SPENQ96T58 SNORA1.1-201ENST00000364671 133 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 RPS29P15-201ENST00000458329 171 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 RNU7-159P-201ENST00000459284 62 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 AC107304.1-201ENST00000604229 296 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 AC093648.1-201ENST00000623546 606 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 MIR520F-201ENST00000384824 87 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
SPENQ96T58 RNU6-821P-201ENST00000390995 107 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 RNA5SP109-201ENST00000391010 116 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 MIR1285-2-201ENST00000408311 88 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.33□□□□□ -2.46
SPENQ96T58 COPS8P3-201ENST00000526024 482 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 AL121579.1-201ENST00000555129 305 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 MIR548Y-201ENST00000582739 110 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 AC092447.9-201ENST00000603395 144 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 AL078595.3-201ENST00000623815 1166 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
SPENQ96T58 AC016909.1-201ENST00000415916 166 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.33□□□□□ -2.46
SPENQ96T58 FABP5P14-201ENST00000437273 393 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 AC109810.1-201ENST00000534066 224 ntBASIC-0.33□□□□□ -2.46
SPENQ96T58 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.33□□□□□ -2.46
SPENQ96T58 AL390237.1-201ENST00000404226 1415 ntBASIC-0.34□□□□□ -2.46
SPENQ96T58 SNORA25B-201ENST00000365507 128 ntBASIC-0.34□□□□□ -2.46
SPENQ96T58 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.34□□□□□ -2.46
SPENQ96T58 MIR194-1-201ENST00000384892 85 ntBASIC-0.34□□□□□ -2.46
SPENQ96T58 MIR643-201ENST00000385267 97 ntBASIC-0.34□□□□□ -2.46
SPENQ96T58 MIR140-201ENST00000385282 100 ntBASIC-0.34□□□□□ -2.46
SPENQ96T58 SNORA75.3-201ENST00000391231 150 ntBASIC-0.34□□□□□ -2.46
SPENQ96T58 SNORD75.1-201ENST00000408373 60 ntBASIC-0.34□□□□□ -2.46
SPENQ96T58 SEPT7P5-201ENST00000434048 306 ntBASIC-0.34□□□□□ -2.46
SPENQ96T58 SNRPEP9-201ENST00000436794 238 ntBASIC-0.34□□□□□ -2.46
SPENQ96T58 SEPT7P4-201ENST00000437076 306 ntBASIC-0.34□□□□□ -2.46
SPENQ96T58 RPS15AP9-201ENST00000439856 381 ntBASIC-0.34□□□□□ -2.46
SPENQ96T58 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.34□□□□□ -2.46
SPENQ96T58 MRPS17P3-201ENST00000465453 385 ntBASIC-0.34□□□□□ -2.46
SPENQ96T58 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.34□□□□□ -2.46
SPENQ96T58 MIR4743-201ENST00000584576 69 ntBASIC-0.34□□□□□ -2.46
SPENQ96T58 RNY4P27-201ENST00000363341 96 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms