Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC093788.1-201ENST00000609356 927 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 AC009268.2-201ENST00000621925 457 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 AC120349.3-201ENST00000624377 529 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
IFT140Q96RY7 AC068647.2-201ENST00000637380 353 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
IFT140Q96RY7 SNORD114-6-201ENST00000364393 72 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 SNORA2A-201ENST00000383885 135 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 RNU6-45P-201ENST00000384471 107 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 RNU6-1300P-201ENST00000391046 108 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 DHFRP6-201ENST00000401776 268 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 RPS3AP37-201ENST00000419176 745 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 MTND4P24-201ENST00000424002 397 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
IFT140Q96RY7 AL669831.1-202ENST00000428504 417 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 AC091860.1-201ENST00000505723 432 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.35□□□□□ -2.35
IFT140Q96RY7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.35□□□□□ -2.35
IFT140Q96RY7 RNU4-54P-201ENST00000516428 129 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 AL356057.1-201ENST00000533798 831 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
IFT140Q96RY7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.35□□□□□ -2.35
IFT140Q96RY7 MIR3664-201ENST00000579074 99 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.35□□□□□ -2.35
IFT140Q96RY7 AL365434.2-201ENST00000607979 234 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 AC040896.1-201ENST00000613819 479 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 RMST_4.1-201ENST00000616886 107 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 AC093648.1-201ENST00000623546 606 ntBASIC0.35□□□□□ -2.35
IFT140Q96RY7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
IFT140Q96RY7 AL590084.2-201ENST00000401481 382 ntBASIC0.34□□□□□ -2.36
IFT140Q96RY7 RNU2-7P-201ENST00000410794 178 ntBASIC0.34□□□□□ -2.36
IFT140Q96RY7 MTND1P16-201ENST00000465177 898 ntBASIC0.34□□□□□ -2.36
IFT140Q96RY7 TMEM251P1-201ENST00000503717 318 ntBASIC0.34□□□□□ -2.36
IFT140Q96RY7 AC110760.3-202ENST00000515177 371 ntBASIC0.34□□□□□ -2.36
IFT140Q96RY7 AC018630.3-201ENST00000542637 96 ntBASIC0.34□□□□□ -2.36
IFT140Q96RY7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.34□□□□□ -2.36
IFT140Q96RY7 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.34□□□□□ -2.36
IFT140Q96RY7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.34□□□□□ -2.36
IFT140Q96RY7 RNU6-1010P-201ENST00000362757 107 ntBASIC0.33□□□□□ -2.36
IFT140Q96RY7 Y_RNA.234-201ENST00000364409 97 ntBASIC0.33□□□□□ -2.36
IFT140Q96RY7 MIR520A-201ENST00000384862 85 ntBASIC0.33□□□□□ -2.36
IFT140Q96RY7 MIR605-201ENST00000385078 83 ntBASIC0.33□□□□□ -2.36
IFT140Q96RY7 MIR548B-201ENST00000385247 97 ntBASIC0.33□□□□□ -2.36
IFT140Q96RY7 SNORD65C-201ENST00000390962 71 ntBASIC0.33□□□□□ -2.36
IFT140Q96RY7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.33□□□□□ -2.36
IFT140Q96RY7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.33□□□□□ -2.36
IFT140Q96RY7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.33□□□□□ -2.36
IFT140Q96RY7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.33□□□□□ -2.36
IFT140Q96RY7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.33□□□□□ -2.36
IFT140Q96RY7 AC020550.1-201ENST00000447385 163 ntBASIC0.33□□□□□ -2.36
IFT140Q96RY7 MTND2P6-201ENST00000455337 1030 ntBASIC0.33□□□□□ -2.36
IFT140Q96RY7 AC074344.1-201ENST00000512823 224 ntBASIC0.33□□□□□ -2.36
IFT140Q96RY7 SNORA3.4-201ENST00000515969 96 ntBASIC0.33□□□□□ -2.36
IFT140Q96RY7 RNU5A-4P-201ENST00000516588 111 ntBASIC0.33□□□□□ -2.36
IFT140Q96RY7 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.33□□□□□ -2.36
IFT140Q96RY7 VN1R83P-201ENST00000595685 445 ntBASIC0.33□□□□□ -2.36
IFT140Q96RY7 AC090578.1-201ENST00000604955 591 ntBASIC0.33□□□□□ -2.36
IFT140Q96RY7 MIR1264-201ENST00000616374 69 ntBASIC0.33□□□□□ -2.36
IFT140Q96RY7 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.33□□□□□ -2.36
IFT140Q96RY7 RNA5SP361-201ENST00000362686 118 ntBASIC0.32□□□□□ -2.36
IFT140Q96RY7 RNU6-223P-201ENST00000362830 107 ntBASIC0.32□□□□□ -2.36
IFT140Q96RY7 RNU6-529P-201ENST00000363383 104 ntBASIC0.32□□□□□ -2.36
IFT140Q96RY7 MIR329-1-201ENST00000385028 80 ntBASIC0.32□□□□□ -2.36
IFT140Q96RY7 AL356776.1-201ENST00000406574 447 ntBASIC0.32□□□□□ -2.36
IFT140Q96RY7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.32□□□□□ -2.36
IFT140Q96RY7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.32□□□□□ -2.36
IFT140Q96RY7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.32□□□□□ -2.36
IFT140Q96RY7 BRK1P2-201ENST00000442875 223 ntBASIC0.32□□□□□ -2.36
IFT140Q96RY7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.32□□□□□ -2.36
IFT140Q96RY7 BTF3P15-201ENST00000455606 336 ntBASIC0.32□□□□□ -2.36
IFT140Q96RY7 RN7SKP256-201ENST00000517201 314 ntBASIC0.32□□□□□ -2.36
IFT140Q96RY7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.32□□□□□ -2.36
IFT140Q96RY7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.32□□□□□ -2.36
IFT140Q96RY7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.32□□□□□ -2.36
IFT140Q96RY7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.32□□□□□ -2.36
IFT140Q96RY7 MIR4637-201ENST00000582405 84 ntBASIC0.32□□□□□ -2.36
IFT140Q96RY7 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.32□□□□□ -2.36
IFT140Q96RY7 MIR1248-201ENST00000629190 106 ntBASIC0.32□□□□□ -2.36
IFT140Q96RY7 AC023934.1-201ENST00000574529 2389 ntBASIC0.32□□□□□ -2.36
IFT140Q96RY7 MIR217-201ENST00000384817 110 ntBASIC0.31□□□□□ -2.36
IFT140Q96RY7 RPS3AP1-201ENST00000413190 320 ntBASIC0.31□□□□□ -2.36
IFT140Q96RY7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.31□□□□□ -2.36
IFT140Q96RY7 BX119904.4-201ENST00000424402 301 ntBASIC0.31□□□□□ -2.36
IFT140Q96RY7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.31□□□□□ -2.36
IFT140Q96RY7 MTATP6P30-201ENST00000443540 664 ntBASIC0.31□□□□□ -2.36
IFT140Q96RY7 MTND1P9-201ENST00000453775 944 ntBASIC0.31□□□□□ -2.36
IFT140Q96RY7 COX6CP6-201ENST00000490840 228 ntBASIC0.31□□□□□ -2.36
IFT140Q96RY7 CYCTP-201ENST00000504253 315 ntBASIC0.31□□□□□ -2.36
IFT140Q96RY7 AC025423.5-201ENST00000550230 219 ntBASIC0.31□□□□□ -2.36
IFT140Q96RY7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.31□□□□□ -2.36
IFT140Q96RY7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.31□□□□□ -2.36
IFT140Q96RY7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
IFT140Q96RY7 AC123767.1-202ENST00000620407 817 ntBASIC0.31□□□□□ -2.36
IFT140Q96RY7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.31□□□□□ -2.36
IFT140Q96RY7 RNU6-655P-201ENST00000362858 107 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 MTND1P21-201ENST00000412991 285 ntBASIC0.3□□□□□ -2.36
IFT140Q96RY7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.3□□□□□ -2.36
IFT140Q96RY7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.3□□□□□ -2.36
IFT140Q96RY7 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms