Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 MIR302D-201ENST00000362275 68 ntBASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 RNU6-439P-201ENST00000384188 106 ntBASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 HLA-S-202ENST00000425174 53 ntBASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 AL589872.1-201ENST00000426602 288 ntBASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 SNRPGP6-201ENST00000451124 220 ntBASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 AL049714.1-201ENST00000466686 347 ntBASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 AC025423.5-201ENST00000550230 219 ntBASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 RN7SKP164-201ENST00000516138 266 ntBASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 MIR5094-201ENST00000578766 85 ntBASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 AL157786.1-207ENST00000627771 695 ntBASIC-0.84□□□□□ -2.54
VPS13AQ96RL7 AC107982.1-201ENST00000507171 1300 ntBASIC-0.85□□□□□ -2.55
VPS13AQ96RL7 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.85□□□□□ -2.55
VPS13AQ96RL7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.85□□□□□ -2.55
VPS13AQ96RL7 MRPS36P2-201ENST00000512569 299 ntBASIC-0.85□□□□□ -2.55
VPS13AQ96RL7 AC022616.3-201ENST00000523940 148 ntBASIC-0.85□□□□□ -2.55
VPS13AQ96RL7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC-0.85□□□□□ -2.55
VPS13AQ96RL7 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC-0.85□□□□□ -2.55
VPS13AQ96RL7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.85□□□□□ -2.55
VPS13AQ96RL7 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 RNU6-748P-201ENST00000384648 107 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 AL136310.1-201ENST00000404926 654 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 AC233266.1-201ENST00000454518 96 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 SNORA31.4-201ENST00000516049 129 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 AL049870.4-201ENST00000555741 486 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 AL009028.1-201ENST00000604895 802 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 AC242852.1-201ENST00000612151 96 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 AC092634.7-201ENST00000621022 103 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 AC244015.1-201ENST00000622301 99 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 MIR892B-201ENST00000401279 77 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 AC022022.1-201ENST00000430304 178 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 MIR5697-201ENST00000578045 78 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 HSPE1P7-201ENST00000604681 321 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 AC139712.2-201ENST00000424302 339 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 RPL23AP33-201ENST00000442301 452 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 AC015908.1-201ENST00000478739 476 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 RNA5SP216-201ENST00000516111 123 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 RNA5SP137-201ENST00000516833 135 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 AC112220.3-201ENST00000605502 502 ntBASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC-0.86□□□□□ -2.55
VPS13AQ96RL7 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.87□□□□□ -2.55
VPS13AQ96RL7 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.87□□□□□ -2.55
VPS13AQ96RL7 AC104332.1-201ENST00000440471 797 ntBASIC-0.87□□□□□ -2.55
VPS13AQ96RL7 AL031313.1-201ENST00000448435 256 ntBASIC-0.87□□□□□ -2.55
VPS13AQ96RL7 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.87□□□□□ -2.55
VPS13AQ96RL7 SNORD114-14-201ENST00000362723 75 ntBASIC-0.87□□□□□ -2.55
VPS13AQ96RL7 MIR767-201ENST00000390228 109 ntBASIC-0.87□□□□□ -2.55
VPS13AQ96RL7 RPL21P32-201ENST00000419877 477 ntBASIC-0.87□□□□□ -2.55
VPS13AQ96RL7 AC113410.1-201ENST00000505029 247 ntBASIC-0.87□□□□□ -2.55
VPS13AQ96RL7 SNORD114-11-201ENST00000363738 75 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 ELOCP30-201ENST00000447108 299 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 RPS26P48-201ENST00000491713 339 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 AC012435.1-202ENST00000568772 240 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 snoU13.28-201ENST00000459235 104 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 SNORA4.4-201ENST00000515921 135 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 RNY4-201ENST00000516507 96 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 AL121579.1-201ENST00000555129 305 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 AC112220.2-201ENST00000605513 533 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 AC068276.1-201ENST00000605793 379 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 AC002381.1-201ENST00000447049 280 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 AC106038.2-201ENST00000520706 568 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 AC116563.2-201ENST00000624751 535 ntBASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.88□□□□□ -2.55
VPS13AQ96RL7 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.89□□□□□ -2.55
VPS13AQ96RL7 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.89□□□□□ -2.55
VPS13AQ96RL7 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.89□□□□□ -2.55
VPS13AQ96RL7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC-0.89□□□□□ -2.55
VPS13AQ96RL7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.89□□□□□ -2.55
VPS13AQ96RL7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC-0.89□□□□□ -2.55
VPS13AQ96RL7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.89□□□□□ -2.55
VPS13AQ96RL7 NCOR1P3-201ENST00000420479 303 ntBASIC-0.89□□□□□ -2.55
VPS13AQ96RL7 AL035398.1-201ENST00000430869 322 ntBASIC-0.89□□□□□ -2.55
VPS13AQ96RL7 USP9YP29-201ENST00000445112 563 ntBASIC-0.89□□□□□ -2.55
VPS13AQ96RL7 RNU6-274P-201ENST00000459566 107 ntBASIC-0.89□□□□□ -2.55
VPS13AQ96RL7 RNU6-917P-201ENST00000516294 104 ntBASIC-0.89□□□□□ -2.55
VPS13AQ96RL7 RNU6-706P-201ENST00000517229 104 ntBASIC-0.89□□□□□ -2.55
VPS13AQ96RL7 AC025423.2-201ENST00000537570 439 ntBASIC-0.89□□□□□ -2.55
VPS13AQ96RL7 RNU6-480P-201ENST00000384332 107 ntBASIC-0.9□□□□□ -2.55
VPS13AQ96RL7 RNU6-1263P-201ENST00000384601 106 ntBASIC-0.9□□□□□ -2.55
VPS13AQ96RL7 DSTNP4-201ENST00000399472 474 ntBASIC-0.9□□□□□ -2.55
VPS13AQ96RL7 AL079342.2-201ENST00000403367 482 ntBASIC-0.9□□□□□ -2.55
VPS13AQ96RL7 MLLT10P1-201ENST00000418346 262 ntBASIC-0.9□□□□□ -2.55
VPS13AQ96RL7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms