Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 SNORA62.6-201ENST00000606322 83 ntBASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 SNORD113-5-201ENST00000607261 78 ntBASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 MIR8057-201ENST00000620957 69 ntBASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNGAP1Q96PV0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 SNORA25.1-201ENST00000362326 128 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 Y_RNA.122-201ENST00000363331 96 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 RNA5SP322-201ENST00000363617 119 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 Y_RNA.286-201ENST00000364813 102 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 Y_RNA.292-201ENST00000364904 97 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-658P-201ENST00000384606 106 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 Y_RNA.569-201ENST00000384749 103 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 SNORD12B-201ENST00000410433 91 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 CYCSP4-201ENST00000429682 331 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 SNRPEP9-201ENST00000436794 238 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 NDUFS5P3-201ENST00000450668 321 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 AP000870.1-201ENST00000472927 406 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 AL162424.1-201ENST00000602325 221 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 AL078605.1-201ENST00000603529 500 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 Z83818.1-201ENST00000603584 150 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 SCARNA4-201ENST00000629045 128 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 AL136964.1-201ENST00000622038 2990 ntBASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.25□□□□□ -1.73
SYNGAP1Q96PV0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 UBE3AP2-201ENST00000429033 2259 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 RNA5SP361-201ENST00000362686 118 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-682P-201ENST00000363843 106 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 RNA5SP240-201ENST00000365355 128 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-17P-201ENST00000384245 107 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-18P-201ENST00000384527 107 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 RNU1-89P-201ENST00000384592 164 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 MIR153-2-201ENST00000385225 87 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 RPS4XP3-201ENST00000398541 413 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 MIR548I2-201ENST00000408348 149 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 AC005002.2-201ENST00000438228 269 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 SNORA71B-202ENST00000439232 272 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 TMSB4XP3-201ENST00000445144 114 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 AC009237.8-201ENST00000445492 379 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 AC006026.2-201ENST00000457376 180 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 AC087477.1-201ENST00000465747 340 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 RPL30P1-201ENST00000488676 339 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 AC010265.1-201ENST00000513509 211 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 SNORD116-28-201ENST00000516123 91 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 SNORA70.16-201ENST00000516390 95 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 TRAV28-201ENST00000557548 323 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 MIR4672-201ENST00000583126 81 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 AL713866.2-201ENST00000603579 219 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 AC005296.1-201ENST00000616145 209 ntBASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SYNGAP1Q96PV0 Y_RNA.8-201ENST00000362353 102 ntBASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-47P-201ENST00000383866 107 ntBASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 SNORD63-201ENST00000384262 68 ntBASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 SNORA48.5-201ENST00000391143 135 ntBASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 U3.37-201ENST00000408528 213 ntBASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 RNU6-1140P-201ENST00000410517 106 ntBASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 AL645939.1-201ENST00000453429 797 ntBASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 SNORA31.8-201ENST00000516327 108 ntBASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 Y_RNA.683-201ENST00000516508 93 ntBASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 SNORA43.2-201ENST00000516652 128 ntBASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 AC090877.1-201ENST00000561418 344 ntBASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 MIR5695-201ENST00000579717 85 ntBASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 RMST_6.1-201ENST00000611980 203 ntBASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 AC021753.1-201ENST00000635724 168 ntBASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 AL359693.1-201ENST00000614959 2407 ntBASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYNGAP1Q96PV0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms