Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 MIR6075-201ENST00000620782 95 ntBASIC2.49□□□□□ -2.01
CMTM3Q96MX0 AC092268.1-201ENST00000342691 405 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 RNU6-227P-201ENST00000362865 103 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 RNU1-33P-201ENST00000364249 162 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 Y_RNA.248-201ENST00000364501 109 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 RNU6-1317P-201ENST00000364582 104 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 RNU6-142P-201ENST00000384019 107 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 RNU6-831P-201ENST00000384548 107 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 MIR23B-201ENST00000384832 97 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 MIR29B2-201ENST00000385055 81 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 BTF3L4P2-201ENST00000392798 346 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 RNU6-1148P-201ENST00000410992 104 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 RNU6-325P-201ENST00000411132 105 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.48□□□□□ -2.01
CMTM3Q96MX0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CMTM3Q96MX0 MTCO1P29-201ENST00000496868 288 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 AC114801.2-201ENST00000503825 781 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 AC016632.1-201ENST00000503994 196 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.48□□□□□ -2.01
CMTM3Q96MX0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.48□□□□□ -2.01
CMTM3Q96MX0 MYL12BP1-201ENST00000569826 507 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 CPDP1-201ENST00000579660 283 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 AC018638.8-201ENST00000588755 281 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 AC018889.1-201ENST00000605372 397 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 AC068944.2-201ENST00000610373 403 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 AC245884.12-201ENST00000615364 59 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 SNORD98-201ENST00000636377 67 ntBASIC2.48□□□□□ -2.01
CMTM3Q96MX0 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.48□□□□□ -2.01
CMTM3Q96MX0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CMTM3Q96MX0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CMTM3Q96MX0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.48□□□□□ -2.01
CMTM3Q96MX0 AC096644.4-201ENST00000563417 2912 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CMTM3Q96MX0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CMTM3Q96MX0 Y_RNA.135-201ENST00000363439 95 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 RNU6-1274P-201ENST00000384557 107 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 YME1L1P1-201ENST00000429435 297 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 USP9YP28-201ENST00000435142 589 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.47□□□□□ -2.01
CMTM3Q96MX0 RPS29P27-201ENST00000463711 170 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 AC117440.1-201ENST00000474107 571 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.47□□□□□ -2.01
CMTM3Q96MX0 RNU6-864P-201ENST00000516256 108 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.47□□□□□ -2.01
CMTM3Q96MX0 AP000889.2-201ENST00000532684 490 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 AC007375.1-201ENST00000554513 578 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 AC009127.3-201ENST00000570531 403 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.47□□□□□ -2.01
CMTM3Q96MX0 MIR3944-201ENST00000581277 108 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.47□□□□□ -2.01
CMTM3Q96MX0 UBL5P2-201ENST00000583788 219 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 AC023043.2-201ENST00000589678 1026 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.47□□□□□ -2.01
CMTM3Q96MX0 BNIP3P10-201ENST00000605360 577 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 AC093913.1-201ENST00000614178 329 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 AL136221.1-201ENST00000621449 509 ntBASIC2.47□□□□□ -2.01
CMTM3Q96MX0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CMTM3Q96MX0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
CMTM3Q96MX0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.47□□□□□ -2.01
CMTM3Q96MX0 AC000403.1-201ENST00000613696 3585 ntBASIC2.46□□□□□ -2.01
CMTM3Q96MX0 RNU6-562P-201ENST00000362731 107 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 Y_RNA.86-201ENST00000363020 111 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 SNORA25.6-201ENST00000364121 118 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 SNORA32.2-201ENST00000384049 122 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 SNORA26.3-201ENST00000391119 136 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 AL591034.2-201ENST00000402839 359 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 HMGB3P2-201ENST00000411913 584 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 AL590135.1-201ENST00000422215 156 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 AC019205.3-201ENST00000424573 156 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.46□□□□□ -2.02
CMTM3Q96MX0 AC112220.1-201ENST00000434628 355 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 IPO7P1-201ENST00000442031 636 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 AC009238.1-201ENST00000442165 424 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 AC016700.2-201ENST00000446011 156 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 AC009237.6-201ENST00000446969 424 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 AC015911.1-201ENST00000495111 156 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 AC091874.1-201ENST00000511402 339 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 IGLV3-17-201ENST00000519099 244 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.46□□□□□ -2.02
CMTM3Q96MX0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.46□□□□□ -2.02
CMTM3Q96MX0 MIR3942-201ENST00000585264 109 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 AC060780.3-201ENST00000589464 80 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 AL356575.1-201ENST00000603008 283 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 AL034555.1-201ENST00000604816 211 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 AC009541.1-201ENST00000438279 2662 ntBASIC2.46□□□□□ -2.02
CMTM3Q96MX0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CMTM3Q96MX0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
CMTM3Q96MX0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CMTM3Q96MX0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CMTM3Q96MX0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CMTM3Q96MX0 MIR6073-201ENST00000352083 89 ntBASIC2.45□□□□□ -2.02
CMTM3Q96MX0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CMTM3Q96MX0 RNU1-23P-201ENST00000363361 144 ntBASIC2.45□□□□□ -2.02
CMTM3Q96MX0 Y_RNA.212-201ENST00000364177 102 ntBASIC2.45□□□□□ -2.02
CMTM3Q96MX0 RNU4-56P-201ENST00000364700 142 ntBASIC2.45□□□□□ -2.02
CMTM3Q96MX0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CMTM3Q96MX0 SNORD116-11-201ENST00000383882 92 ntBASIC2.45□□□□□ -2.02
CMTM3Q96MX0 RNU6-1013P-201ENST00000384180 107 ntBASIC2.45□□□□□ -2.02
CMTM3Q96MX0 RNU6-933P-201ENST00000384424 107 ntBASIC2.45□□□□□ -2.02
CMTM3Q96MX0 Y_RNA.504-201ENST00000384481 104 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms