Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM47Q96LD4 AL021997.2-201ENST00000615674 271 ntBASIC4.92□□□□□ -1.62
TRIM47Q96LD4 AC013791.1-201ENST00000616619 62 ntBASIC4.92□□□□□ -1.62
TRIM47Q96LD4 AC091932.3-201ENST00000624223 323 ntBASIC4.92□□□□□ -1.62
TRIM47Q96LD4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM47Q96LD4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM47Q96LD4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM47Q96LD4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM47Q96LD4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM47Q96LD4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM47Q96LD4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM47Q96LD4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM47Q96LD4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM47Q96LD4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM47Q96LD4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM47Q96LD4 RNA5SP175-201ENST00000364275 119 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 SNORA73.2-201ENST00000364946 201 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 SNORD58C-201ENST00000365223 64 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 MIR487A-201ENST00000385009 80 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 RNU6-821P-201ENST00000390995 107 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM47Q96LD4 AL627311.1-201ENST00000431514 115 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 HSPE1P21-201ENST00000438283 308 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 AC004386.2-201ENST00000441858 148 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM47Q96LD4 AC010095.1-201ENST00000443543 144 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 HMGN2P32-201ENST00000444648 269 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 RNU6-625P-201ENST00000459412 107 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 GMPSP1-201ENST00000514075 579 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 RNU6-927P-201ENST00000516199 100 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 Y_RNA.692-201ENST00000516627 105 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM47Q96LD4 AC090142.3-201ENST00000519012 385 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM47Q96LD4 AL391903.3-201ENST00000612158 163 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 AC004467.1-201ENST00000615678 330 ntBASIC4.91□□□□□ -1.62
TRIM47Q96LD4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM47Q96LD4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM47Q96LD4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM47Q96LD4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
TRIM47Q96LD4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.9□□□□□ -1.62
TRIM47Q96LD4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
TRIM47Q96LD4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM47Q96LD4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM47Q96LD4 U8.10-201ENST00000384260 133 ntBASIC4.9□□□□□ -1.63
TRIM47Q96LD4 RNU6-813P-201ENST00000384691 107 ntBASIC4.9□□□□□ -1.63
TRIM47Q96LD4 RNU2-43P-201ENST00000410306 190 ntBASIC4.9□□□□□ -1.63
TRIM47Q96LD4 GEMIN8P3-201ENST00000445417 720 ntBASIC4.9□□□□□ -1.63
TRIM47Q96LD4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM47Q96LD4 RPL35AP15-201ENST00000468042 339 ntBASIC4.9□□□□□ -1.63
TRIM47Q96LD4 SNORD116-26-201ENST00000516006 96 ntBASIC4.9□□□□□ -1.63
TRIM47Q96LD4 RNU5F-2P-201ENST00000516066 82 ntBASIC4.9□□□□□ -1.63
TRIM47Q96LD4 RNU6-561P-201ENST00000516222 102 ntBASIC4.9□□□□□ -1.63
TRIM47Q96LD4 AL121772.2-201ENST00000614331 297 ntBASIC4.9□□□□□ -1.63
TRIM47Q96LD4 AL391261.4-201ENST00000616012 481 ntBASIC4.9□□□□□ -1.63
TRIM47Q96LD4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TRIM47Q96LD4 MIR4496-201ENST00000635896 61 ntBASIC4.9□□□□□ -1.63
TRIM47Q96LD4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM47Q96LD4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM47Q96LD4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM47Q96LD4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM47Q96LD4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM47Q96LD4 AC027290.2-201ENST00000623210 18662 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM47Q96LD4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TRIM47Q96LD4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.89□□□□□ -1.63
TRIM47Q96LD4 CENPCP1-201ENST00000533085 2578 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM47Q96LD4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM47Q96LD4 RNU6-801P-201ENST00000364087 105 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 RNU6-1082P-201ENST00000364574 107 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 Y_RNA.329-201ENST00000365209 107 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 SNORA9-201ENST00000384215 133 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 SNORA26.5-201ENST00000391215 123 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 RPS3AP1-201ENST00000413190 320 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 EIF1AXP1-201ENST00000419267 435 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 Z82209.1-201ENST00000422141 2135 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 Y_RNA.649-201ENST00000459077 103 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 RPS26P28-201ENST00000470806 348 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM47Q96LD4 RNU6-58P-201ENST00000517143 103 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM47Q96LD4 RPL23AP97-201ENST00000568955 471 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 MIR7154-201ENST00000620673 73 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM47Q96LD4 AL596275.2-206ENST00000641957 626 ntBASIC4.89□□□□□ -1.63
TRIM47Q96LD4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM47Q96LD4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
TRIM47Q96LD4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM47Q96LD4 RNA5SP119-201ENST00000362715 117 ntBASIC4.88□□□□□ -1.63
TRIM47Q96LD4 Y_RNA.114-201ENST00000363265 113 ntBASIC4.88□□□□□ -1.63
TRIM47Q96LD4 RNU6-137P-201ENST00000363680 108 ntBASIC4.88□□□□□ -1.63
TRIM47Q96LD4 Y_RNA.219-201ENST00000364232 113 ntBASIC4.88□□□□□ -1.63
TRIM47Q96LD4 RNU6-969P-201ENST00000383900 105 ntBASIC4.88□□□□□ -1.63
TRIM47Q96LD4 MT-TT-201ENST00000387460 66 ntBASIC4.88□□□□□ -1.63
TRIM47Q96LD4 RNU2-54P-201ENST00000410299 190 ntBASIC4.88□□□□□ -1.63
TRIM47Q96LD4 RPL39P29-201ENST00000447779 157 ntBASIC4.88□□□□□ -1.63
TRIM47Q96LD4 IFNWP4-201ENST00000453148 294 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms