Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 ZNF192P1-203ENST00000565888 810 ntBASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 AC060766.3-201ENST00000591442 263 ntBASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 AC006386.2-201ENST00000624491 75 ntBASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 AC012005.1-201ENST00000624575 75 ntBASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CHAMP1Q96JM3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 Y_RNA.64-201ENST00000362845 102 ntBASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 Y_RNA.123-201ENST00000363338 102 ntBASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 RNU6-898P-201ENST00000365627 104 ntBASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 SNORA51.11-201ENST00000384442 131 ntBASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 Y_RNA.526-201ENST00000384572 110 ntBASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 RNU6-658P-201ENST00000384606 106 ntBASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 SNORA12.2-201ENST00000391040 156 ntBASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 RPL26P27-201ENST00000414397 437 ntBASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 FTH1P6-201ENST00000430768 320 ntBASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 RN7SKP210-201ENST00000459176 261 ntBASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 AC007458.1-201ENST00000542812 373 ntBASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 AC104581.2-201ENST00000572227 430 ntBASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 AC090740.1-201ENST00000623193 2262 ntBASIC3.84□□□□□ -1.79
CHAMP1Q96JM3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.84□□□□□ -1.8
CHAMP1Q96JM3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 RNU6-50P-201ENST00000362356 103 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 RNU4-50P-201ENST00000364361 141 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 RNA5SP126-201ENST00000365092 109 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 RNU6-1026P-201ENST00000384465 108 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 UBA52P6-201ENST00000399822 382 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 MTCYBP2-201ENST00000407745 171 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 RNA5SP229-201ENST00000410809 99 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 RNA5SP120-201ENST00000410900 112 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 RNU6-130P-201ENST00000411112 103 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 MTCO3P19-201ENST00000415864 321 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 AC125238.1-201ENST00000448842 249 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 AC104564.1-201ENST00000493028 407 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 RNY3P15-201ENST00000516297 97 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 RNU6-897P-201ENST00000517135 105 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 AP004607.1-201ENST00000524456 203 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 AMZ2P1-203ENST00000565833 850 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 MIR6134-201ENST00000617606 109 ntBASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHAMP1Q96JM3 AL356274.2-201ENST00000624379 3752 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 RNU6-770P-201ENST00000363929 105 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 RNU6-270P-201ENST00000364131 105 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.405-201ENST00000383979 100 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.451-201ENST00000384200 100 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.524-201ENST00000384564 100 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.561-201ENST00000384694 100 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 MIR190B-201ENST00000401119 79 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 MIR888-201ENST00000401186 77 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 RPL23AP22-201ENST00000437556 453 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 RNU2-53P-201ENST00000516257 147 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 Y_RNA.680-201ENST00000516441 93 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 AC034114.1-201ENST00000520293 285 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 AC068657.1-201ENST00000520807 306 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 IGHV3-76-201ENST00000522465 295 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 MIR8057-201ENST00000620957 69 ntBASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.82□□□□□ -1.8
CHAMP1Q96JM3 AC241585.2-209ENST00000638217 143 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms