Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 YME1L1P1-201ENST00000429435 297 ntBASIC4.78□□□□□ -1.64
HLA-CQ95604 AC004386.2-201ENST00000441858 148 ntBASIC4.78□□□□□ -1.64
HLA-CQ95604 AL162151.2-201ENST00000448875 158 ntBASIC4.78□□□□□ -1.64
HLA-CQ95604 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-CQ95604 RNU5E-3P-201ENST00000515913 68 ntBASIC4.78□□□□□ -1.64
HLA-CQ95604 AC025754.2-201ENST00000606491 432 ntBASIC4.78□□□□□ -1.64
HLA-CQ95604 MIR6133-201ENST00000617057 108 ntBASIC4.78□□□□□ -1.64
HLA-CQ95604 OR51H2P-202ENST00000641424 3046 ntBASIC4.78□□□□□ -1.64
HLA-CQ95604 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-CQ95604 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-CQ95604 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-CQ95604 AL159152.1-201ENST00000635019 2587 ntBASIC4.78□□□□□ -1.64
HLA-CQ95604 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-CQ95604 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-CQ95604 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
HLA-CQ95604 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HLA-CQ95604 AL136164.4-201ENST00000625013 2135 ntBASIC4.78□□□□□ -1.64
HLA-CQ95604 AL022322.2-201ENST00000624072 20397 ntBASIC4.78□□□□□ -1.64
HLA-CQ95604 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HLA-CQ95604 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-CQ95604 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-CQ95604 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-CQ95604 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-CQ95604 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HLA-CQ95604 SNORA70.6-201ENST00000383934 134 ntBASIC4.77□□□□□ -1.65
HLA-CQ95604 RNA5SP241-201ENST00000391326 114 ntBASIC4.77□□□□□ -1.65
HLA-CQ95604 RNA5SP504-201ENST00000410676 117 ntBASIC4.77□□□□□ -1.65
HLA-CQ95604 AL356095.1-201ENST00000417217 199 ntBASIC4.77□□□□□ -1.65
HLA-CQ95604 AL158823.1-201ENST00000418441 478 ntBASIC4.77□□□□□ -1.65
HLA-CQ95604 GOT2P5-201ENST00000433995 546 ntBASIC4.77□□□□□ -1.65
HLA-CQ95604 AL161651.1-201ENST00000440882 223 ntBASIC4.77□□□□□ -1.65
HLA-CQ95604 RN7SL197P-201ENST00000466981 299 ntBASIC4.77□□□□□ -1.65
HLA-CQ95604 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
HLA-CQ95604 RPS29P2-201ENST00000479278 136 ntBASIC4.77□□□□□ -1.65
HLA-CQ95604 AC005921.1-201ENST00000510589 286 ntBASIC4.77□□□□□ -1.65
HLA-CQ95604 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-CQ95604 AC113403.1-201ENST00000604910 193 ntBASIC4.77□□□□□ -1.65
HLA-CQ95604 RPL17P51-201ENST00000605218 238 ntBASIC4.77□□□□□ -1.65
HLA-CQ95604 MIR6867-201ENST00000610636 67 ntBASIC4.77□□□□□ -1.65
HLA-CQ95604 AC018692.3-201ENST00000623929 123 ntBASIC4.77□□□□□ -1.65
HLA-CQ95604 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-CQ95604 AL136164.3-201ENST00000624429 3978 ntBASIC4.77□□□□□ -1.65
HLA-CQ95604 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-CQ95604 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-CQ95604 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
HLA-CQ95604 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-CQ95604 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HLA-CQ95604 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-CQ95604 ZNF702P-202ENST00000434269 1966 ntBASIC4.76□□□□□ -1.65
HLA-CQ95604 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-CQ95604 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-CQ95604 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-CQ95604 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
HLA-CQ95604 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-CQ95604 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-CQ95604 SNORD87-201ENST00000364849 89 ntBASIC4.76□□□□□ -1.65
HLA-CQ95604 MIR7-3-201ENST00000384898 110 ntBASIC4.76□□□□□ -1.65
HLA-CQ95604 MT-TT-201ENST00000387460 66 ntBASIC4.76□□□□□ -1.65
HLA-CQ95604 AL591034.1-201ENST00000407447 340 ntBASIC4.76□□□□□ -1.65
HLA-CQ95604 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
HLA-CQ95604 RNU6-588P-201ENST00000410281 105 ntBASIC4.76□□□□□ -1.65
HLA-CQ95604 AL691449.1-201ENST00000426570 421 ntBASIC4.76□□□□□ -1.65
HLA-CQ95604 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-CQ95604 HIGD1AP1-201ENST00000550979 275 ntBASIC4.76□□□□□ -1.65
HLA-CQ95604 MIR5006-201ENST00000583027 110 ntBASIC4.76□□□□□ -1.65
HLA-CQ95604 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.76□□□□□ -1.65
HLA-CQ95604 CR392039.5-201ENST00000623201 510 ntBASIC4.76□□□□□ -1.65
HLA-CQ95604 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-CQ95604 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-CQ95604 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-CQ95604 AC112198.2-201ENST00000426589 6996 ntBASIC4.75□□□□□ -1.65
HLA-CQ95604 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-CQ95604 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-CQ95604 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HLA-CQ95604 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HLA-CQ95604 AP001029.2-203ENST00000589795 4910 ntBASIC4.75□□□□□ -1.65
HLA-CQ95604 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-CQ95604 SNORA25.7-201ENST00000364375 127 ntBASIC4.75□□□□□ -1.65
HLA-CQ95604 SNORA79-201ENST00000408376 140 ntBASIC4.75□□□□□ -1.65
HLA-CQ95604 AC004866.1-201ENST00000411748 78 ntBASIC4.75□□□□□ -1.65
HLA-CQ95604 AC245047.4-201ENST00000433189 144 ntBASIC4.75□□□□□ -1.65
HLA-CQ95604 AL441985.1-201ENST00000457727 251 ntBASIC4.75□□□□□ -1.65
HLA-CQ95604 RPS29P20-201ENST00000489592 171 ntBASIC4.75□□□□□ -1.65
HLA-CQ95604 RNA5SP230-201ENST00000517039 122 ntBASIC4.75□□□□□ -1.65
HLA-CQ95604 AC090142.3-201ENST00000519012 385 ntBASIC4.75□□□□□ -1.65
HLA-CQ95604 uc_338.13-201ENST00000618243 179 ntBASIC4.75□□□□□ -1.65
HLA-CQ95604 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-CQ95604 AC039056.2-201ENST00000622261 511 ntBASIC4.75□□□□□ -1.65
HLA-CQ95604 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-CQ95604 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-CQ95604 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-CQ95604 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-CQ95604 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-CQ95604 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-CQ95604 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-CQ95604 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-CQ95604 AC063976.2-201ENST00000425667 3556 ntBASIC4.74□□□□□ -1.65
HLA-CQ95604 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-CQ95604 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HLA-CQ95604 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms