Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 YPEL5P1-201ENST00000419731 367 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.94□□□□□ -1.78
BRF1Q92994 RPL21P40-201ENST00000428586 483 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 AL591043.1-201ENST00000432461 424 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 AC243964.1-201ENST00000441814 261 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.94□□□□□ -1.78
BRF1Q92994 RNU1-61P-201ENST00000516107 151 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 CR383656.8-201ENST00000549046 145 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 SYF2P1-201ENST00000550658 413 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.94□□□□□ -1.78
BRF1Q92994 AC010928.2-201ENST00000588017 287 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 RPL23AP88-201ENST00000605759 454 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 U3.45-201ENST00000607547 219 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 AC006133.1-201ENST00000617106 264 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 SDR42E1P4-201ENST00000620894 481 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 AC091903.1-201ENST00000624322 454 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 U6.92-201ENST00000636464 89 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRF1Q92994 AC017071.1-201ENST00000564407 2204 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRF1Q92994 MTND5P6-201ENST00000422338 1798 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BRF1Q92994 RNU1-70P-201ENST00000362618 164 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 Y_RNA.60-201ENST00000362831 98 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 SNORD115-32-201ENST00000364079 82 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 RNU6-968P-201ENST00000384076 107 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 RNU6-17P-201ENST00000384245 107 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 RNU6-18P-201ENST00000384527 107 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 SNORD115-46-201ENST00000390982 71 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 RNU6-1203P-201ENST00000410703 110 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 RNU2-25P-201ENST00000411041 191 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 Z82188.1-201ENST00000436709 154 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.93□□□□□ -1.78
BRF1Q92994 AL031659.1-201ENST00000447075 539 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.93□□□□□ -1.78
BRF1Q92994 RNU7-87P-201ENST00000459343 62 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 RPS4XP13-201ENST00000483219 789 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 RPL23AP75-201ENST00000491601 451 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 AC093663.1-201ENST00000497190 394 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.93□□□□□ -1.78
BRF1Q92994 MRPS36P4-201ENST00000534436 298 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 NACAP3-201ENST00000552100 481 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.93□□□□□ -1.78
BRF1Q92994 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.93□□□□□ -1.78
BRF1Q92994 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.93□□□□□ -1.78
BRF1Q92994 AC034229.5-201ENST00000624258 185 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 CUL1P1-201ENST00000509510 2425 ntBASIC3.93□□□□□ -1.78
BRF1Q92994 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRF1Q92994 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.92□□□□□ -1.78
BRF1Q92994 MIR335-201ENST00000362173 94 ntBASIC3.92□□□□□ -1.78
BRF1Q92994 Y_RNA.84-201ENST00000363011 104 ntBASIC3.92□□□□□ -1.78
BRF1Q92994 RNU6-884P-201ENST00000363889 107 ntBASIC3.92□□□□□ -1.78
BRF1Q92994 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.92□□□□□ -1.78
BRF1Q92994 Y_RNA.439-201ENST00000384119 94 ntBASIC3.92□□□□□ -1.78
BRF1Q92994 MIR200C-201ENST00000384980 68 ntBASIC3.92□□□□□ -1.78
BRF1Q92994 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.92□□□□□ -1.78
BRF1Q92994 MTND4LP30-201ENST00000454092 297 ntBASIC3.92□□□□□ -1.78
BRF1Q92994 AC006539.3-201ENST00000454258 129 ntBASIC3.92□□□□□ -1.78
BRF1Q92994 SNORA70.14-201ENST00000516205 110 ntBASIC3.92□□□□□ -1.78
BRF1Q92994 AC016256.1-201ENST00000547971 354 ntBASIC3.92□□□□□ -1.78
BRF1Q92994 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.92□□□□□ -1.78
BRF1Q92994 AC012433.1-201ENST00000588916 398 ntBASIC3.92□□□□□ -1.78
BRF1Q92994 RMST_6.1-201ENST00000611980 203 ntBASIC3.92□□□□□ -1.78
BRF1Q92994 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
BRF1Q92994 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
BRF1Q92994 AC007496.3-201ENST00000624987 3443 ntBASIC3.92□□□□□ -1.78
BRF1Q92994 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
BRF1Q92994 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
BRF1Q92994 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.92□□□□□ -1.78
BRF1Q92994 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.92□□□□□ -1.78
BRF1Q92994 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BRF1Q92994 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BRF1Q92994 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
BRF1Q92994 RNU1-75P-201ENST00000347264 129 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 RNU1-100P-201ENST00000365255 165 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 HSPE1P26-201ENST00000405341 275 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 RNU6-1245P-201ENST00000411130 106 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 AL159169.1-201ENST00000421119 127 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 AC096920.1-201ENST00000423991 241 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 RPL23AP95-201ENST00000426806 265 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 FTH1P6-201ENST00000430768 320 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 AL590664.1-201ENST00000448065 339 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.91□□□□□ -1.78
BRF1Q92994 HMGN2P16-201ENST00000456802 261 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 HMGN1P18-201ENST00000457642 277 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 U8.22-201ENST00000459141 133 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 AC008155.2-201ENST00000464337 397 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 AC098869.1-201ENST00000481627 292 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 AC097462.2-201ENST00000504623 481 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 SNORA31.6-201ENST00000516241 130 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.91□□□□□ -1.78
BRF1Q92994 AC007375.1-201ENST00000554513 578 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.91□□□□□ -1.78
BRF1Q92994 AP001282.2-201ENST00000616149 309 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 AC024581.2-201ENST00000619986 252 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 AC097372.5-201ENST00000623665 376 ntBASIC3.91□□□□□ -1.78
BRF1Q92994 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms