Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 MIR29B2-201ENST00000385055 81 ntBASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 NCOR1P3-201ENST00000420479 303 ntBASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 RPL23AP30-201ENST00000432419 501 ntBASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 GDI2P2-201ENST00000445131 608 ntBASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 AC134050.1-201ENST00000495088 933 ntBASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 AL133373.1-201ENST00000497098 94 ntBASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 RNU2-10P-201ENST00000516375 211 ntBASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 AL158042.1-201ENST00000605338 460 ntBASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 AC080078.3-201ENST00000605407 463 ntBASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 snoU2_19.1-201ENST00000362361 80 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 RNY4P16-201ENST00000364768 94 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 MIR10A-201ENST00000385043 110 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 RNU6-1242P-201ENST00000391052 103 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 RNU6-757P-201ENST00000410334 100 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 MTCYBP5-201ENST00000423752 1135 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 AL353777.1-201ENST00000425552 326 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 AL022238.1-201ENST00000442557 355 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 RPL23AP35-201ENST00000451906 501 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 AC011604.1-201ENST00000545978 196 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 BNIP3P6-201ENST00000549284 499 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 AC012414.6-201ENST00000568241 401 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 MIR3169-201ENST00000578032 83 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 SNORD114-21-201ENST00000606412 72 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 AC092140.2-201ENST00000618027 521 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 AP000484.1-201ENST00000620067 1252 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 AL121890.5-201ENST00000620848 304 ntBASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.11□□□□□ -2.23
CCDC112Q8NEF3 MTND4P16-201ENST00000466108 1367 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 MIR302D-201ENST00000362275 68 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 RNU6-212P-201ENST00000362642 104 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 RNU6-384P-201ENST00000364900 104 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 AL031779.1-201ENST00000415663 330 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 RPL22P18-201ENST00000417197 377 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 CBX3P6-201ENST00000430257 527 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 RPS15AP10-201ENST00000432472 382 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 AL035666.1-201ENST00000446195 348 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 RPL30P1-201ENST00000488676 339 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 AC093852.1-201ENST00000503587 266 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 AC009646.1-201ENST00000510455 318 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 Y_RNA.687-201ENST00000516558 91 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 SNORA43.2-201ENST00000516652 128 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 SUB1P4-201ENST00000566062 339 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 MIR3118-1-201ENST00000581787 76 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 BNIP3P31-201ENST00000604515 566 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 AC097478.2-201ENST00000610572 514 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 AC063943.3-201ENST00000615562 356 ntBASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CCDC112Q8NEF3 RNU6-23P-201ENST00000363283 107 ntBASIC1.09□□□□□ -2.23
CCDC112Q8NEF3 RNA5SP493-201ENST00000364115 91 ntBASIC1.09□□□□□ -2.23
CCDC112Q8NEF3 SNORD114-6-201ENST00000364393 72 ntBASIC1.09□□□□□ -2.23
CCDC112Q8NEF3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.09□□□□□ -2.23
CCDC112Q8NEF3 Y_RNA.597-201ENST00000410463 100 ntBASIC1.09□□□□□ -2.23
CCDC112Q8NEF3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.09□□□□□ -2.23
CCDC112Q8NEF3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CCDC112Q8NEF3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.09□□□□□ -2.23
CCDC112Q8NEF3 AC090115.3-201ENST00000553218 849 ntBASIC1.09□□□□□ -2.23
CCDC112Q8NEF3 AC112187.2-201ENST00000604345 283 ntBASIC1.09□□□□□ -2.23
CCDC112Q8NEF3 MIR8063-201ENST00000621930 81 ntBASIC1.09□□□□□ -2.23
CCDC112Q8NEF3 AC007792.1-201ENST00000623023 402 ntBASIC1.09□□□□□ -2.23
CCDC112Q8NEF3 SCARNA4-202ENST00000625402 129 ntBASIC1.09□□□□□ -2.23
CCDC112Q8NEF3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.09□□□□□ -2.23
CCDC112Q8NEF3 AL445523.1-201ENST00000451184 1362 ntBASIC1.08□□□□□ -2.24
CCDC112Q8NEF3 OR4G2P-201ENST00000328113 903 ntBASIC1.08□□□□□ -2.24
CCDC112Q8NEF3 RNA5SP327-201ENST00000362494 101 ntBASIC1.08□□□□□ -2.24
CCDC112Q8NEF3 RNU6-1187P-201ENST00000364771 110 ntBASIC1.08□□□□□ -2.24
CCDC112Q8NEF3 SNORA25.8-201ENST00000364831 128 ntBASIC1.08□□□□□ -2.24
CCDC112Q8NEF3 SNORD1A-201ENST00000364968 72 ntBASIC1.08□□□□□ -2.24
CCDC112Q8NEF3 MIR222-201ENST00000384992 110 ntBASIC1.08□□□□□ -2.24
CCDC112Q8NEF3 MIR1267-201ENST00000408723 78 ntBASIC1.08□□□□□ -2.24
CCDC112Q8NEF3 BTF3L4P1-201ENST00000413813 468 ntBASIC1.08□□□□□ -2.24
CCDC112Q8NEF3 RPS4XP11-201ENST00000446897 772 ntBASIC1.08□□□□□ -2.24
CCDC112Q8NEF3 EXOSC3P1-201ENST00000448649 500 ntBASIC1.08□□□□□ -2.24
CCDC112Q8NEF3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.08□□□□□ -2.24
CCDC112Q8NEF3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms