Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 Y_RNA.54-201ENST00000362766 105 ntBASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 snoU2_19.2-201ENST00000363024 80 ntBASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 Y_RNA.539-201ENST00000384635 107 ntBASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 SNORD115-46-201ENST00000390982 71 ntBASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 EEF1A1P41-201ENST00000414667 207 ntBASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 AL135938.1-201ENST00000443141 297 ntBASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 RN7SL93P-201ENST00000463035 293 ntBASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 RN7SKP132-201ENST00000516001 208 ntBASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 NDUFB9P3-201ENST00000521269 501 ntBASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 CASP1P1-201ENST00000526345 212 ntBASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 AC099506.2-201ENST00000623074 221 ntBASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LINC00116Q8NCU8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 AC018555.1-201ENST00000567548 1980 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 MIR335-201ENST00000362173 94 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 Y_RNA.65-201ENST00000362846 100 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 RNU6-78P-201ENST00000362897 107 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 Y_RNA.143-201ENST00000363520 106 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 SNORA71.1-201ENST00000364523 117 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 BTF3L4P2-201ENST00000392798 346 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 RPS29P13-201ENST00000402041 169 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 RNA5SP104-201ENST00000410989 118 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 AC098614.2-201ENST00000426040 255 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 RPL21P40-201ENST00000428586 483 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 PRELID3BP1-201ENST00000457142 540 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 SNORA31.6-201ENST00000516241 130 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 RN7SKP272-201ENST00000516988 232 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 SNORA31.18-201ENST00000517043 134 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 TRAV28-201ENST00000557548 323 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 AC136932.1-201ENST00000574771 208 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 AC009779.6-201ENST00000603972 165 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 uc_338.32-201ENST00000615087 172 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 SRP72P2-201ENST00000344851 1979 ntBASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LINC00116Q8NCU8 HSPA8P1-201ENST00000425843 1833 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 FTLP6-201ENST00000355274 422 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 Y_RNA.462-201ENST00000384268 102 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 Y_RNA.785-201ENST00000384290 109 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 AL603910.2-201ENST00000407268 136 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 RNU2-71P-201ENST00000411395 189 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 TMEM167AP1-201ENST00000423409 219 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 SNRPEP9-201ENST00000436794 238 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 AC009237.8-201ENST00000445492 379 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 TOMM22P6-201ENST00000465035 409 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 MIR2355-201ENST00000517199 87 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 SNORA81.3-201ENST00000517283 198 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 AP002770.2-201ENST00000543613 532 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 MIR4300-201ENST00000581016 96 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 AC027309.3-201ENST00000623419 351 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 AL450472.1-202ENST00000637286 180 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 AC017071.1-201ENST00000564407 2204 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 LINC02555-201ENST00000563933 1951 ntBASIC4.02□□□□□ -1.77
LINC00116Q8NCU8 AC008568.2-201ENST00000623862 2313 ntBASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 AC007785.2-201ENST00000598627 1916 ntBASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 Y_RNA.352-201ENST00000365439 102 ntBASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 RNU6-72P-201ENST00000384285 79 ntBASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 RNY3P4-201ENST00000384428 101 ntBASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 MIR548M-201ENST00000408260 86 ntBASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 RNU2-14P-201ENST00000411053 191 ntBASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 AC124916.1-201ENST00000444020 547 ntBASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 AC108938.1-201ENST00000451204 136 ntBASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 U8.22-201ENST00000459141 133 ntBASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 RPL23AP67-201ENST00000465341 474 ntBASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 ANXA2P1-201ENST00000505539 926 ntBASIC4.01□□□□□ -1.77
LINC00116Q8NCU8 RNU6-1073P-201ENST00000517182 106 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms