Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PGBD3Q8N328 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PGBD3Q8N328 CPHL1P-201ENST00000461341 3407 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PGBD3Q8N328 Y_RNA.172-201ENST00000363765 102 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 RNU6-801P-201ENST00000364087 105 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 RNU6-1141P-201ENST00000364520 107 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 RNU1-100P-201ENST00000365255 165 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 AL359837.1-201ENST00000381357 287 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 Y_RNA.572-201ENST00000384757 98 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 MIR134-201ENST00000385258 73 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 AL512633.1-201ENST00000399931 655 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 RN7SKP61-201ENST00000410642 295 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 RNA5SP146-201ENST00000410743 123 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 RNU7-197P-201ENST00000458836 62 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 AC091153.1-201ENST00000466297 402 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PGBD3Q8N328 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.47□□□□□ -1.69
PGBD3Q8N328 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PGBD3Q8N328 RN7SKP164-201ENST00000516138 266 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.47□□□□□ -1.69
PGBD3Q8N328 AL359198.2-201ENST00000611836 194 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 MIR4679-1-201ENST00000637619 75 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PGBD3Q8N328 AC002546.1-201ENST00000588041 2504 ntBASIC4.47□□□□□ -1.69
PGBD3Q8N328 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PGBD3Q8N328 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.47□□□□□ -1.69
PGBD3Q8N328 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PGBD3Q8N328 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PGBD3Q8N328 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
PGBD3Q8N328 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PGBD3Q8N328 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PGBD3Q8N328 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.46□□□□□ -1.7
PGBD3Q8N328 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PGBD3Q8N328 RNU6-834P-201ENST00000362367 110 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 RNU6-778P-201ENST00000363269 103 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 RNU6-799P-201ENST00000363567 107 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 RN7SKP280-201ENST00000364196 304 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 RNU6-1248P-201ENST00000391096 64 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 RNY4P18-201ENST00000391107 89 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 SNORA26.5-201ENST00000391215 123 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 RN7SKP53-201ENST00000411337 315 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 AC092047.1-201ENST00000424997 240 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.46□□□□□ -1.7
PGBD3Q8N328 AC006499.6-201ENST00000511169 607 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 RNU6-436P-201ENST00000516171 114 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 AC090877.1-201ENST00000561418 344 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.46□□□□□ -1.7
PGBD3Q8N328 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PGBD3Q8N328 AC140479.6-201ENST00000633535 357 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PGBD3Q8N328 AC099654.7-201ENST00000635788 2127 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PGBD3Q8N328 AC010733.2-201ENST00000589496 5702 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 AC118273.1-201ENST00000525324 3006 ntBASIC4.46□□□□□ -1.7
PGBD3Q8N328 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PGBD3Q8N328 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PGBD3Q8N328 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.45□□□□□ -1.7
PGBD3Q8N328 RNU6-727P-201ENST00000363592 107 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 RNU6-1056P-201ENST00000383996 107 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 RNU1-13P-201ENST00000384499 162 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 Y_RNA.525-201ENST00000384570 113 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 FTH1P15-201ENST00000406984 280 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 RNA5SP317-201ENST00000410176 116 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 RNA5SP311-201ENST00000411290 116 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 RPL26P27-201ENST00000414397 437 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.45□□□□□ -1.7
PGBD3Q8N328 MTATP6P7-201ENST00000453315 681 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 HMGN2P16-201ENST00000456802 261 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 AC108022.1-201ENST00000493466 478 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 SCARNA8-201ENST00000515924 131 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 RNA5SP446-201ENST00000515955 82 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 RNA5SP315-201ENST00000516340 116 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 RNA5SP312-201ENST00000517068 116 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 SNORA31.23-201ENST00000517219 133 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 CYCSP23-201ENST00000519781 313 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PGBD3Q8N328 CR383656.8-201ENST00000549046 145 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 HSPE1P5-201ENST00000561489 272 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 AC112484.5-201ENST00000624189 228 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 MIR3674-201ENST00000636576 68 ntBASIC4.45□□□□□ -1.7
PGBD3Q8N328 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PGBD3Q8N328 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.45□□□□□ -1.7
PGBD3Q8N328 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PGBD3Q8N328 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PGBD3Q8N328 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
PGBD3Q8N328 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PGBD3Q8N328 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PGBD3Q8N328 RNU6-199P-201ENST00000362954 107 ntBASIC4.44□□□□□ -1.7
PGBD3Q8N328 RNU6-793P-201ENST00000384233 104 ntBASIC4.44□□□□□ -1.7
PGBD3Q8N328 MIR3065-201ENST00000390137 79 ntBASIC4.44□□□□□ -1.7
PGBD3Q8N328 SNORA11F-201ENST00000408237 128 ntBASIC4.44□□□□□ -1.7
PGBD3Q8N328 RPS26P42-201ENST00000413485 326 ntBASIC4.44□□□□□ -1.7
PGBD3Q8N328 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.44□□□□□ -1.7
PGBD3Q8N328 RPL23AP52-201ENST00000439311 478 ntBASIC4.44□□□□□ -1.7
PGBD3Q8N328 RPL21P129-201ENST00000491732 478 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms