Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SYNE4Q8N205 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SYNE4Q8N205 RNU1-75P-201ENST00000347264 129 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 RNU6-874P-201ENST00000362390 105 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 MIR196B-201ENST00000384852 84 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 RNU6-847P-201ENST00000411115 108 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 RNU6-325P-201ENST00000411132 105 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 RNU6-293P-201ENST00000411259 106 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 Z85995.1-201ENST00000415547 335 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.6□□□□□ -1.83
SYNE4Q8N205 NDUFB4P7-201ENST00000423198 363 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 AC099799.1-201ENST00000439809 192 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.6□□□□□ -1.83
SYNE4Q8N205 OR2AQ1P-201ENST00000451972 200 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 PCMTD1P1-201ENST00000455560 355 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 CEACAMP4-201ENST00000457676 421 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 RNU6-953P-201ENST00000459154 107 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 RNU7-170P-201ENST00000459303 61 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 RPS23P3-201ENST00000470993 430 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 RN7SL442P-201ENST00000473804 320 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 HMGN2P13-201ENST00000476476 274 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 RPL31P60-201ENST00000478450 367 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 AC008413.1-201ENST00000511864 177 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 SNORA64.4-201ENST00000516632 81 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 TRAV32-201ENST00000553993 340 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.6□□□□□ -1.83
SYNE4Q8N205 HMGB1P14-201ENST00000557424 591 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.6□□□□□ -1.83
SYNE4Q8N205 AC125232.2-201ENST00000592457 143 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 AC002545.1-201ENST00000592511 181 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 AL158827.2-201ENST00000602494 330 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 AC016727.2-201ENST00000603988 621 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 AL121917.1-203ENST00000605534 577 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 AP002826.1-201ENST00000608835 315 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 AC034102.8-201ENST00000615146 484 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 AL691447.3-201ENST00000635020 330 ntBASIC3.6□□□□□ -1.83
SYNE4Q8N205 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SYNE4Q8N205 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SYNE4Q8N205 AC008669.1-201ENST00000565823 2178 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.59□□□□□ -1.83
SYNE4Q8N205 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SYNE4Q8N205 Y_RNA.214-201ENST00000364201 112 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 Y_RNA.424-201ENST00000384063 103 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 SNORA70B-201ENST00000384210 135 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 Y_RNA.461-201ENST00000384263 103 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 Y_RNA.480-201ENST00000384364 102 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 Y_RNA.556-201ENST00000384677 113 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 MIR887-201ENST00000401258 79 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 MIR1252-201ENST00000408861 65 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 RNU6-1156P-201ENST00000410365 100 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 RNU2-38P-201ENST00000410856 79 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 RHEBP3-201ENST00000411920 351 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 AC003685.2-201ENST00000422795 395 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 HMGB1P27-201ENST00000431429 603 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.59□□□□□ -1.83
SYNE4Q8N205 OSTCP8-201ENST00000445117 448 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.59□□□□□ -1.83
SYNE4Q8N205 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.59□□□□□ -1.83
SYNE4Q8N205 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.59□□□□□ -1.83
SYNE4Q8N205 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SYNE4Q8N205 AC022616.4-201ENST00000522985 181 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 AC005899.2-201ENST00000584353 90 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 MIR548AC-201ENST00000585049 88 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 AC243829.7-201ENST00000633081 225 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SYNE4Q8N205 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.59□□□□□ -1.83
SYNE4Q8N205 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
SYNE4Q8N205 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.59□□□□□ -1.84
SYNE4Q8N205 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
SYNE4Q8N205 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
SYNE4Q8N205 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.59□□□□□ -1.84
SYNE4Q8N205 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 MTND5P7-201ENST00000413558 1798 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SYNE4Q8N205 UBE2L2-201ENST00000254302 429 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 Y_RNA.60-201ENST00000362831 98 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 Y_RNA.64-201ENST00000362845 102 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 RNU6-512P-201ENST00000364438 103 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.58□□□□□ -1.84
SYNE4Q8N205 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.58□□□□□ -1.84
SYNE4Q8N205 AL353621.1-201ENST00000418219 243 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 MTND2P29-201ENST00000438595 412 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.58□□□□□ -1.84
SYNE4Q8N205 RNU7-169P-201ENST00000459456 61 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 RPL37P6-201ENST00000460682 294 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 RPL23AP62-201ENST00000463396 453 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 RPL17P19-201ENST00000489069 552 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 AC040926.1-201ENST00000530195 238 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.58□□□□□ -1.84
SYNE4Q8N205 OR1M4P-201ENST00000589199 287 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 MIR1244-1-201ENST00000612829 85 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 MIR1244-3-201ENST00000635744 85 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 MIR1244-2-201ENST00000636449 85 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 MIR1244-4-202ENST00000636813 85 ntBASIC3.58□□□□□ -1.84
SYNE4Q8N205 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SYNE4Q8N205 PWAR6-201ENST00000552334 4618 ntBASIC3.57□□□□□ -1.84
SYNE4Q8N205 Y_RNA.105-201ENST00000363182 111 ntBASIC3.57□□□□□ -1.84
SYNE4Q8N205 Y_RNA.324-201ENST00000365165 102 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms