Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SFTPA1Q8IWL2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.05□□□□□ -1.92
SFTPA1Q8IWL2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SFTPA1Q8IWL2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 ZNF72P-201ENST00000425869 1908 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 SNORD56.1-201ENST00000362913 68 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 SNORD50.1-201ENST00000362987 71 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 RNU6-1156P-201ENST00000410365 100 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 RNA5SP38-201ENST00000410750 119 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 AC096644.2-201ENST00000429278 159 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 AC099799.1-201ENST00000439809 192 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 RPS12P18-201ENST00000442381 270 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 HMGN1P18-201ENST00000457642 277 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 MRPL42P6-201ENST00000486397 371 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 AC116655.1-201ENST00000508324 901 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 AC079600.2-201ENST00000550076 130 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 AC021739.1-201ENST00000559631 174 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 MIR4425-201ENST00000580572 84 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 MIR1244-1-201ENST00000612829 85 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 AL162373.1-201ENST00000620433 407 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 MIR1244-3-201ENST00000635744 85 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 MIR1244-2-201ENST00000636449 85 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 MIR1244-4-202ENST00000636813 85 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 AC241585.2-209ENST00000638217 143 ntBASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SFTPA1Q8IWL2 AC091812.1-201ENST00000432235 1948 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 ZNF299P-201ENST00000406845 1804 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 Y_RNA.577-201ENST00000384794 101 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 MIR1183-201ENST00000408856 89 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 EIF4EP2-201ENST00000422816 654 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 MTCYBP10-201ENST00000424905 650 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 AC124916.1-201ENST00000444020 547 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 AL353752.1-201ENST00000454946 260 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 HMGN2P7-201ENST00000456186 273 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 AL136097.1-201ENST00000456945 913 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 MTND5P22-201ENST00000458380 195 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 AC010401.1-201ENST00000463867 348 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 RNU4-77P-201ENST00000516692 156 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 AC023442.1-201ENST00000531247 422 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 MIR4319-201ENST00000577285 85 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 AC009318.2-201ENST00000610917 651 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 AC110491.1-201ENST00000562191 2010 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 AC093010.3-201ENST00000570269 15214 ntBASIC3.03□□□□□ -1.92
SFTPA1Q8IWL2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 AC005592.1-201ENST00000566527 1640 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 RNU1-115P-201ENST00000365329 160 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 RNU6-198P-201ENST00000384258 104 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 BTF3L4P2-201ENST00000392798 346 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 RNU6-985P-201ENST00000410182 104 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 RNU2-23P-201ENST00000410545 195 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 AC092423.1-201ENST00000430165 186 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 MTND3P2-201ENST00000438452 342 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 RNU7-169P-201ENST00000459456 61 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 AC021146.2-201ENST00000504736 556 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 SCGB1D5P-201ENST00000515134 247 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 RNU6-764P-201ENST00000516396 105 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 RNA5SP367-201ENST00000516557 118 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 AC006199.1-201ENST00000548728 219 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 HSBP1P1-201ENST00000555205 166 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 MIR5696-201ENST00000578474 85 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 SNORD58B-201ENST00000607313 66 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 MIR3199-2-201ENST00000636243 86 ntBASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SFTPA1Q8IWL2 AC002546.1-201ENST00000588041 2504 ntBASIC3.01□□□□□ -1.93
SFTPA1Q8IWL2 AC009541.1-201ENST00000438279 2662 ntBASIC3.01□□□□□ -1.93
SFTPA1Q8IWL2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SFTPA1Q8IWL2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.01□□□□□ -1.93
SFTPA1Q8IWL2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SFTPA1Q8IWL2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.01□□□□□ -1.93
SFTPA1Q8IWL2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.01□□□□□ -1.93
SFTPA1Q8IWL2 Y_RNA.39-201ENST00000362620 98 ntBASIC3.01□□□□□ -1.93
SFTPA1Q8IWL2 RNU6-1309P-201ENST00000363305 108 ntBASIC3.01□□□□□ -1.93
SFTPA1Q8IWL2 RNU6-595P-201ENST00000363944 107 ntBASIC3.01□□□□□ -1.93
SFTPA1Q8IWL2 RNA5SP252-201ENST00000391131 119 ntBASIC3.01□□□□□ -1.93
SFTPA1Q8IWL2 Y_RNA.645-201ENST00000391229 102 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms