Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 RNA5SP197-201ENST00000363357 119 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 RNU6-81P-201ENST00000365608 104 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 RNU6-937P-201ENST00000384325 106 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 Y_RNA.602-201ENST00000410535 92 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 FABP5P15-201ENST00000453566 214 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 AP000873.1-201ENST00000463987 400 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 MRPL42P6-201ENST00000486397 371 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 AL161713.1-201ENST00000555538 145 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 AC023824.2-201ENST00000566185 400 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 AC012468.1-201ENST00000604888 430 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 AC072026.1-201ENST00000605023 201 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 AC011921.3-201ENST00000605540 361 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 YPEL5P2-201ENST00000605553 359 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 AC073657.2-201ENST00000605661 303 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 AL161629.2-201ENST00000615347 275 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 AL590240.4-201ENST00000616908 390 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 SNORA50A-202ENST00000629536 136 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 AL513302.2-201ENST00000562313 1842 ntBASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
LIMS2Q7Z4I7 AP001486.2-201ENST00000561652 5113 ntBASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 RNU6-227P-201ENST00000362865 103 ntBASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 SNORD46.1-201ENST00000364139 104 ntBASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 RNU2-37P-201ENST00000410695 177 ntBASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 AL358453.1-201ENST00000422522 250 ntBASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 MTCO1P39-201ENST00000426148 480 ntBASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 NDUFB4P10-201ENST00000452541 359 ntBASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 SNORD108-201ENST00000459332 71 ntBASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 RNU7-175P-201ENST00000515915 61 ntBASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 CASP1P1-201ENST00000526345 212 ntBASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 AL121603.1-201ENST00000553815 142 ntBASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 MIR4659A-201ENST00000580269 81 ntBASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LIMS2Q7Z4I7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.59□□□□□ -1.84
LIMS2Q7Z4I7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.59□□□□□ -1.84
LIMS2Q7Z4I7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.59□□□□□ -1.84
LIMS2Q7Z4I7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 Y_RNA.44-201ENST00000362676 108 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 RNU6-1301P-201ENST00000362724 104 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 RNU6-47P-201ENST00000383866 107 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 Y_RNA.504-201ENST00000384481 104 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 SNORD78.2-201ENST00000391076 69 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 RNA5SP120-201ENST00000410900 112 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 Y_RNA.623-201ENST00000411128 95 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 AL627311.1-201ENST00000431514 115 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 AL591043.1-201ENST00000432461 424 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 RPL21P104-201ENST00000464143 478 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 RN7SL601P-201ENST00000471221 293 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 PHBP14-201ENST00000512887 367 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 RNU7-200P-201ENST00000516105 62 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 RNU6-1278P-201ENST00000516130 107 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 Y_RNA.706-201ENST00000516933 99 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 HMGB1P14-201ENST00000557424 591 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 AC090617.3-201ENST00000573670 475 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 AC060766.3-201ENST00000591442 263 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 U73479.1-201ENST00000618062 168 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 AC097372.5-201ENST00000623665 376 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 AC090617.7-201ENST00000623952 126 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 U6.106-201ENST00000636360 105 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 Z83843.1-201ENST00000604070 3685 ntBASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LIMS2Q7Z4I7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LIMS2Q7Z4I7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LIMS2Q7Z4I7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms