Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RPS29P25-201ENST00000481709 171 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 Y_RNA.665-201ENST00000516177 98 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 AC109329.1-201ENST00000518744 317 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 CYCSP26-201ENST00000534107 320 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 MIR3126-201ENST00000577443 74 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 BNIP3P25-201ENST00000596023 559 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 AC104458.1-201ENST00000608243 463 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 MIR6895-201ENST00000613497 78 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 SNORD56.1-201ENST00000362913 68 ntBASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 RNU1-148P-201ENST00000384472 162 ntBASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AC138623.1-201ENST00000418060 216 ntBASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 ARL5AP4-201ENST00000430731 512 ntBASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AL161788.1-201ENST00000441805 169 ntBASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AC007969.2-201ENST00000441891 191 ntBASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 FGF7P6-202ENST00000451282 293 ntBASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AC068781.1-201ENST00000488231 618 ntBASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 MTND4LP26-201ENST00000518144 282 ntBASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 CBX3P7-201ENST00000532876 502 ntBASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 MIR5692C1-201ENST00000585309 91 ntBASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 VN1R107P-201ENST00000601784 209 ntBASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AC007014.2-201ENST00000615581 479 ntBASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AC009233.1-201ENST00000616477 371 ntBASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
NUP54Q7Z3B4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.4□□□□□ -2.02
NUP54Q7Z3B4 MTND4P5-201ENST00000435821 1374 ntBASIC2.4□□□□□ -2.02
NUP54Q7Z3B4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 Y_RNA.111-201ENST00000363248 100 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 Y_RNA.510-201ENST00000384511 114 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 RNU6-332P-201ENST00000391193 108 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 RPS29P13-201ENST00000402041 169 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 Y_RNA.615-201ENST00000410769 117 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 USP9YP20-201ENST00000419224 558 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 MRPS10P2-201ENST00000431226 381 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 AC011816.1-201ENST00000441346 546 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 AL031274.1-201ENST00000450334 232 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 AL109933.2-201ENST00000452651 260 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 IGLV3-17-201ENST00000519099 244 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 RNU6-323P-201ENST00000521915 107 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 AC105137.2-201ENST00000569073 466 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 BNIP3P16-201ENST00000589779 534 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 AC060766.3-201ENST00000591442 263 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 AL357078.3-201ENST00000607528 618 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 AL121757.2-201ENST00000611223 313 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 MIR3662-201ENST00000637030 95 ntBASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NUP54Q7Z3B4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 Y_RNA.100-201ENST00000363141 102 ntBASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 RNU6-336P-201ENST00000364891 107 ntBASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 AL355497.1-201ENST00000406262 551 ntBASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 RNU6-1140P-201ENST00000410517 106 ntBASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 AC108938.1-201ENST00000451204 136 ntBASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 AC083904.1-201ENST00000487828 231 ntBASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 SNORA25.11-201ENST00000515935 105 ntBASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 AC090136.1-201ENST00000520009 240 ntBASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 SNORA59B-202ENST00000578183 701 ntBASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 AC073410.2-201ENST00000603240 332 ntBASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 AC002553.4-201ENST00000616896 331 ntBASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 AC007792.1-201ENST00000623023 402 ntBASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 AC002543.1-201ENST00000299783 1954 ntBASIC2.39□□□□□ -2.03
NUP54Q7Z3B4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 SNORD62.1-201ENST00000362541 86 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 RNU6-428P-201ENST00000362942 107 ntBASIC2.38□□□□□ -2.03
NUP54Q7Z3B4 Y_RNA.157-201ENST00000363638 102 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms