Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.1□□□□□ -2.23
SCXQ7RTU7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.1□□□□□ -2.23
SCXQ7RTU7 TAF9P1-201ENST00000445421 515 ntBASIC1.1□□□□□ -2.23
SCXQ7RTU7 AL035666.1-201ENST00000446195 348 ntBASIC1.1□□□□□ -2.23
SCXQ7RTU7 TAF9P2-201ENST00000454958 515 ntBASIC1.1□□□□□ -2.23
SCXQ7RTU7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.1□□□□□ -2.23
SCXQ7RTU7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.1□□□□□ -2.23
SCXQ7RTU7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.1□□□□□ -2.23
SCXQ7RTU7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.1□□□□□ -2.23
SCXQ7RTU7 AC115990.1-201ENST00000526957 301 ntBASIC1.1□□□□□ -2.23
SCXQ7RTU7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.1□□□□□ -2.23
SCXQ7RTU7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
SCXQ7RTU7 RPL21P5-201ENST00000554662 472 ntBASIC1.1□□□□□ -2.23
SCXQ7RTU7 MIR4498-201ENST00000577599 66 ntBASIC1.1□□□□□ -2.23
SCXQ7RTU7 AC018889.1-201ENST00000605372 397 ntBASIC1.1□□□□□ -2.23
SCXQ7RTU7 AC091304.9-201ENST00000612091 226 ntBASIC1.1□□□□□ -2.23
SCXQ7RTU7 AC019226.2-201ENST00000625973 424 ntBASIC1.1□□□□□ -2.23
SCXQ7RTU7 MIR1248-201ENST00000629190 106 ntBASIC1.1□□□□□ -2.23
SCXQ7RTU7 U4.7-201ENST00000638126 106 ntBASIC1.1□□□□□ -2.23
SCXQ7RTU7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.1□□□□□ -2.23
SCXQ7RTU7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
SCXQ7RTU7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.09□□□□□ -2.23
SCXQ7RTU7 MTND5P17-201ENST00000418405 1603 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 Y_RNA.4-201ENST00000362333 112 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 RNU6-661P-201ENST00000362409 107 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 RNU6-179P-201ENST00000363350 107 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 RNY1P12-201ENST00000364251 105 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 RNU5E-7P-201ENST00000365290 117 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SCXQ7RTU7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
SCXQ7RTU7 U8.10-201ENST00000384260 133 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.09□□□□□ -2.23
SCXQ7RTU7 AL356583.2-201ENST00000426536 280 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.09□□□□□ -2.23
SCXQ7RTU7 AL591043.1-201ENST00000432461 424 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 AC112492.4-201ENST00000456549 352 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.09□□□□□ -2.23
SCXQ7RTU7 AC104806.1-201ENST00000508720 308 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 AC009646.1-201ENST00000510455 318 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.09□□□□□ -2.23
SCXQ7RTU7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 AC087441.2-201ENST00000529141 262 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 AP005435.4-201ENST00000529514 284 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.09□□□□□ -2.23
SCXQ7RTU7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.09□□□□□ -2.23
SCXQ7RTU7 TRAV32-201ENST00000553993 340 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.09□□□□□ -2.23
SCXQ7RTU7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.09□□□□□ -2.23
SCXQ7RTU7 MIR3618-201ENST00000580330 88 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 AC073539.2-201ENST00000597113 165 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 snoU13.31-201ENST00000607291 104 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 AL359740.1-201ENST00000624340 592 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 Z69720.2-201ENST00000624755 279 ntBASIC1.09□□□□□ -2.23
SCXQ7RTU7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.09□□□□□ -2.23
SCXQ7RTU7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.09□□□□□ -2.24
SCXQ7RTU7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
SCXQ7RTU7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
SCXQ7RTU7 MTND4P23-201ENST00000447723 1363 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
SCXQ7RTU7 RNU6-1285P-201ENST00000363480 105 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 RNU6-169P-201ENST00000365336 107 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.08□□□□□ -2.24
SCXQ7RTU7 CYCSP33-201ENST00000414485 327 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 Z99497.1-201ENST00000421282 135 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 AL358453.1-201ENST00000422522 250 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 AL590556.1-201ENST00000423231 483 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.08□□□□□ -2.24
SCXQ7RTU7 MTATP6P16-201ENST00000434543 526 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.08□□□□□ -2.24
SCXQ7RTU7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.08□□□□□ -2.24
SCXQ7RTU7 EPS15P1-201ENST00000448836 336 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 AL122001.1-201ENST00000457027 370 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.08□□□□□ -2.24
SCXQ7RTU7 RAP1BP2-201ENST00000478270 544 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 AC132942.1-201ENST00000486753 483 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 AC022447.4-201ENST00000504053 364 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 AC116562.3-201ENST00000506136 177 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 MTND3P25-201ENST00000509243 135 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 AC104136.1-201ENST00000512969 394 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 RNU5F-2P-201ENST00000516066 82 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 SCARNA24.1-201ENST00000516465 137 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 AP003072.2-201ENST00000527756 676 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 AC068587.5-201ENST00000528506 175 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 AP002453.2-201ENST00000533503 320 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.08□□□□□ -2.24
SCXQ7RTU7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.08□□□□□ -2.24
SCXQ7RTU7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.08□□□□□ -2.24
SCXQ7RTU7 AP000654.2-201ENST00000605633 586 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 AC004223.4-201ENST00000612426 332 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 AC063943.3-201ENST00000615562 356 ntBASIC1.08□□□□□ -2.24
SCXQ7RTU7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
SCXQ7RTU7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.08□□□□□ -2.24
SCXQ7RTU7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SCXQ7RTU7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.07□□□□□ -2.24
SCXQ7RTU7 SNORD32B-201ENST00000364460 84 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 SNORD48-201ENST00000364953 64 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 SNORD115-7-201ENST00000365306 82 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms