Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 AL031313.1-201ENST00000448435 256 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 BUD31P2-201ENST00000449374 300 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 AP001324.2-201ENST00000461163 319 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 RPF2P2-201ENST00000504693 896 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 AC092634.7-201ENST00000621022 103 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 MIR1246-201ENST00000636535 73 ntBASIC-0.51□□□□□ -2.49
VPS13CQ709C8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS13CQ709C8 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS13CQ709C8 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.52□□□□□ -2.49
VPS13CQ709C8 SNORA18.1-201ENST00000363418 128 ntBASIC-0.52□□□□□ -2.49
VPS13CQ709C8 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.52□□□□□ -2.49
VPS13CQ709C8 RNU6-747P-201ENST00000390928 104 ntBASIC-0.52□□□□□ -2.49
VPS13CQ709C8 RNU6-241P-201ENST00000391148 104 ntBASIC-0.52□□□□□ -2.49
VPS13CQ709C8 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC-0.52□□□□□ -2.49
VPS13CQ709C8 AL589872.1-201ENST00000426602 288 ntBASIC-0.52□□□□□ -2.49
VPS13CQ709C8 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC-0.52□□□□□ -2.49
VPS13CQ709C8 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS13CQ709C8 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS13CQ709C8 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.52□□□□□ -2.49
VPS13CQ709C8 CYB5AP5-201ENST00000549779 389 ntBASIC-0.52□□□□□ -2.49
VPS13CQ709C8 AL157786.1-207ENST00000627771 695 ntBASIC-0.52□□□□□ -2.49
VPS13CQ709C8 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS13CQ709C8 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC-0.52□□□□□ -2.49
VPS13CQ709C8 PNPLA4P1-201ENST00000458328 305 ntBASIC-0.52□□□□□ -2.49
VPS13CQ709C8 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC-0.52□□□□□ -2.49
VPS13CQ709C8 AL357094.1-201ENST00000603845 844 ntBASIC-0.52□□□□□ -2.49
VPS13CQ709C8 AC068647.2-201ENST00000637380 353 ntBASIC-0.52□□□□□ -2.49
VPS13CQ709C8 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC-0.53□□□□□ -2.49
VPS13CQ709C8 RNU4-79P-201ENST00000362764 141 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-0.53□□□□□ -2.49
VPS13CQ709C8 MRPL42P4-201ENST00000453267 443 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 RNU7-157P-201ENST00000459600 66 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 AL512310.8-201ENST00000550183 120 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.53□□□□□ -2.49
VPS13CQ709C8 MIR5094-201ENST00000578766 85 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 MTND5P17-201ENST00000418405 1603 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 RPL7P55-201ENST00000450522 746 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 KATNBL1P6-201ENST00000453433 915 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 AC104057.1-201ENST00000515547 497 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 AC023442.1-201ENST00000531247 422 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 AL353778.1-201ENST00000603149 408 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 AL360181.4-201ENST00000621752 134 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.53□□□□□ -2.49
VPS13CQ709C8 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.53□□□□□ -2.49
VPS13CQ709C8 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC-0.53□□□□□ -2.49
VPS13CQ709C8 ELOCP24-201ENST00000456370 334 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 RN7SKP258-201ENST00000517151 304 ntBASIC-0.53□□□□□ -2.49
VPS13CQ709C8 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC-0.53□□□□□ -2.49
VPS13CQ709C8 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC-0.53□□□□□ -2.49
VPS13CQ709C8 SNORD115-3-201ENST00000363100 82 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 RNU6-284P-201ENST00000411105 106 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.54□□□□□ -2.5
VPS13CQ709C8 RNU6-969P-201ENST00000383900 105 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 RNU6-1083P-201ENST00000384022 107 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 RNY3P14-201ENST00000384309 102 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
VPS13CQ709C8 SNORA75.2-201ENST00000391138 150 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 RNU7-56P-201ENST00000458744 62 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 AC010587.2-201ENST00000511727 448 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.54□□□□□ -2.5
VPS13CQ709C8 AC024940.5-201ENST00000622889 474 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 AC110792.3-201ENST00000595906 1614 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
VPS13CQ709C8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.54□□□□□ -2.5
VPS13CQ709C8 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.54□□□□□ -2.5
VPS13CQ709C8 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC-0.54□□□□□ -2.5
VPS13CQ709C8 AC093648.1-201ENST00000623546 606 ntBASIC-0.54□□□□□ -2.5
VPS13CQ709C8 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.54□□□□□ -2.5
VPS13CQ709C8 SNORD115-24-201ENST00000363528 82 ntBASIC-0.55□□□□□ -2.5
VPS13CQ709C8 MIR29C-201ENST00000385231 88 ntBASIC-0.55□□□□□ -2.5
VPS13CQ709C8 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC-0.55□□□□□ -2.5
VPS13CQ709C8 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC-0.55□□□□□ -2.5
VPS13CQ709C8 HNRNPDLP3-201ENST00000456745 380 ntBASIC-0.55□□□□□ -2.5
VPS13CQ709C8 MTCO3P2-201ENST00000457365 171 ntBASIC-0.55□□□□□ -2.5
VPS13CQ709C8 AC114755.3-201ENST00000481111 251 ntBASIC-0.55□□□□□ -2.5
VPS13CQ709C8 AP002004.2-201ENST00000531656 154 ntBASIC-0.55□□□□□ -2.5
VPS13CQ709C8 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.55□□□□□ -2.5
VPS13CQ709C8 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC-0.55□□□□□ -2.5
VPS13CQ709C8 AL160275.3-201ENST00000423876 471 ntBASIC-0.55□□□□□ -2.5
VPS13CQ709C8 AC018868.1-201ENST00000491307 315 ntBASIC-0.55□□□□□ -2.5
VPS13CQ709C8 SNORA25.12-201ENST00000516202 82 ntBASIC-0.55□□□□□ -2.5
VPS13CQ709C8 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC-0.55□□□□□ -2.5
VPS13CQ709C8 AC025678.1-201ENST00000567861 338 ntBASIC-0.55□□□□□ -2.5
VPS13CQ709C8 AL359697.1-201ENST00000624879 587 ntBASIC-0.55□□□□□ -2.5
VPS13CQ709C8 MIR593-201ENST00000384856 100 ntBASIC-0.55□□□□□ -2.5
VPS13CQ709C8 MTCYBP3-201ENST00000445588 1137 ntBASIC-0.55□□□□□ -2.5
VPS13CQ709C8 snoU109.2-201ENST00000459316 135 ntBASIC-0.55□□□□□ -2.5
VPS13CQ709C8 MIR8063-201ENST00000621930 81 ntBASIC-0.55□□□□□ -2.5
VPS13CQ709C8 MTCO3P18-201ENST00000440206 761 ntBASIC-0.56□□□□□ -2.5
VPS13CQ709C8 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.56□□□□□ -2.5
VPS13CQ709C8 AL162395.1-201ENST00000457882 422 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms