Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 MIR4713-201ENST00000582691 75 ntBASIC1.34□□□□□ -2.19
SMARCD3Q6STE5 AC087752.4-201ENST00000605911 462 ntBASIC1.34□□□□□ -2.19
SMARCD3Q6STE5 AL139286.2-201ENST00000606838 396 ntBASIC1.34□□□□□ -2.19
SMARCD3Q6STE5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.34□□□□□ -2.19
SMARCD3Q6STE5 MIR6134-201ENST00000617606 109 ntBASIC1.34□□□□□ -2.19
SMARCD3Q6STE5 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.34□□□□□ -2.19
SMARCD3Q6STE5 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SMARCD3Q6STE5 CDC27P3-201ENST00000635418 1910 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 RNU6-179P-201ENST00000363350 107 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 RNU6-384P-201ENST00000364900 104 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 RNU6-1280P-201ENST00000365211 107 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 SNORD116-2-201ENST00000384274 95 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 RNU6-456P-201ENST00000384493 107 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 RNU6-1179P-201ENST00000384667 107 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 Y_RNA.553-201ENST00000384670 102 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 SNORD116-6-201ENST00000384711 96 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 SNORA40.19-201ENST00000390846 128 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 FTH1P15-201ENST00000406984 280 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 RNU2-9P-201ENST00000410194 145 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 USP9YP6-201ENST00000413550 854 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 RPL21P90-201ENST00000415692 466 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 MTCO2P34-201ENST00000421994 607 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 GPR143P-201ENST00000434155 205 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 MTND2P22-201ENST00000444325 1033 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 HMGN2P23-201ENST00000456759 269 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC112771.1-201ENST00000463581 102 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC018437.1-201ENST00000492214 406 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC023194.1-201ENST00000493084 308 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 ARL2BPP4-201ENST00000506854 471 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC104806.1-201ENST00000508720 308 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 ACA59.2-201ENST00000517061 156 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 RNU6-430P-201ENST00000517078 107 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC092325.1-201ENST00000566449 554 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC026271.5-201ENST00000577873 130 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 SNORD53B-201ENST00000577887 78 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AL713866.2-201ENST00000603579 219 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AL022154.1-201ENST00000604698 785 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC016925.2-201ENST00000605108 242 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 RN7SKP299-201ENST00000606679 301 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 MIR6715A-201ENST00000615929 79 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC009509.4-201ENST00000619202 509 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC099842.1-201ENST00000619919 596 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AC090582.1-201ENST00000636321 199 ntBASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.33□□□□□ -2.2
SMARCD3Q6STE5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 AL390237.1-201ENST00000404226 1415 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 SNORD115-3-201ENST00000363100 82 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 RNU6-395P-201ENST00000365662 106 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 Y_RNA.381-201ENST00000365666 102 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 SNORD116-9-201ENST00000384000 95 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 SNORD116-3-201ENST00000384287 95 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 SNORD116-7-201ENST00000384404 95 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 SNORD116-5-201ENST00000384462 95 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 MIR764-201ENST00000390811 85 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 DEFB108C-201ENST00000400154 252 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 RN7SKP51-201ENST00000410781 304 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 Y_RNA.623-201ENST00000411128 95 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 PIGFP2-201ENST00000421400 651 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 AL365338.1-201ENST00000422282 858 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 MTCO2P11-201ENST00000431069 680 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 VN1R108P-201ENST00000431580 830 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 MTCO3P5-201ENST00000433620 714 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 C1DP4-201ENST00000455429 424 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 BTF3P15-201ENST00000455606 336 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 TPT1P7-201ENST00000458300 517 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 RPS29P15-201ENST00000458329 171 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 AC006512.1-201ENST00000468816 291 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 MTND3P25-201ENST00000509243 135 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 AC079140.3-201ENST00000511111 550 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 RNU1-86P-201ENST00000516108 154 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
SMARCD3Q6STE5 RNU1-107P-201ENST00000516617 154 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms