Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RNU1-61P-201ENST00000516107 151 ntBASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 RNU6-143P-201ENST00000516942 93 ntBASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 MIR2355-201ENST00000517199 87 ntBASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 AP006245.1-201ENST00000522549 120 ntBASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 MIR4325-201ENST00000583049 90 ntBASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 AC011921.3-201ENST00000605540 361 ntBASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CNKSR3Q6P9H4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
CNKSR3Q6P9H4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.84□□□□□ -1.8
CNKSR3Q6P9H4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
CNKSR3Q6P9H4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.84□□□□□ -1.8
CNKSR3Q6P9H4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 AC058791.1-201ENST00000608412 3198 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 MIR448-201ENST00000362131 111 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 MIR412-201ENST00000362142 91 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 RNU6-1301P-201ENST00000362724 104 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 RNU6-1167P-201ENST00000363227 94 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 RNU6-740P-201ENST00000364734 105 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 Y_RNA.292-201ENST00000364904 97 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 RNU6-81P-201ENST00000365608 104 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 RNU6-1081P-201ENST00000384537 107 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 RN7SKP111-201ENST00000410349 271 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 MRPL42P6-201ENST00000486397 371 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 AK3P2-201ENST00000507976 429 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 PHBP14-201ENST00000512887 367 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 SCARNA15.2-201ENST00000516409 127 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 Y_RNA.706-201ENST00000516933 99 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 AC109479.2-201ENST00000517842 174 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 ZNF192P1-203ENST00000565888 810 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 RPL23AP78-201ENST00000599928 470 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 AC072026.1-201ENST00000605023 201 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 AC005046.1-201ENST00000608515 625 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 AC107294.1-201ENST00000609524 467 ntBASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.83□□□□□ -1.8
CNKSR3Q6P9H4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 RNU4-90P-201ENST00000362773 141 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 Y_RNA.123-201ENST00000363338 102 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 RNU6-1020P-201ENST00000363684 107 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 Y_RNA.286-201ENST00000364813 102 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 SNORD50.2-201ENST00000365465 70 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 RNU6-804P-201ENST00000384286 107 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 MIR493-201ENST00000385254 89 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 U3.26-201ENST00000391236 204 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 AL358453.1-201ENST00000422522 250 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 NDUFB4P7-201ENST00000423198 363 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 Z82188.1-201ENST00000436709 154 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 COX6CP14-201ENST00000469580 174 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 RNU7-175P-201ENST00000515915 61 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 IGKV2-26-201ENST00000518305 343 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 MIR5680-201ENST00000577577 84 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 AC002545.1-201ENST00000592511 181 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 AL365265.1-201ENST00000621045 234 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 AC097372.5-201ENST00000623665 376 ntBASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CNKSR3Q6P9H4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 Y_RNA.383-201ENST00000383855 97 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 SNORD63-201ENST00000384262 68 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 Y_RNA.504-201ENST00000384481 104 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 SNORD78.2-201ENST00000391076 69 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 YPEL5P1-201ENST00000419731 367 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 TOMM22P6-201ENST00000465035 409 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 AC091021.1-201ENST00000468051 388 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 RNU6-579P-201ENST00000516879 102 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 RN7SKP209-201ENST00000516888 304 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 AC005476.1-201ENST00000554427 397 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 AC090617.3-201ENST00000573670 475 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 AC060766.3-201ENST00000591442 263 ntBASIC3.81□□□□□ -1.8
CNKSR3Q6P9H4 AC008121.1-201ENST00000603244 268 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms