Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNY1P16-201ENST00000363063 111 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 RNU6-238P-201ENST00000363313 106 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 RNY3P11-201ENST00000364153 102 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 SNORA63.7-201ENST00000365579 123 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 RNU6-166P-201ENST00000384371 107 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 RNU6-790P-201ENST00000384479 105 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.533-201ENST00000384596 114 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 SNORA40C-201ENST00000391285 128 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 RPL21P1-201ENST00000399532 476 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 AL513475.1-201ENST00000406602 315 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.618-201ENST00000410949 107 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.623-201ENST00000411128 95 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 AL451074.5-201ENST00000415894 435 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 CECR9-201ENST00000453421 199 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 AC013470.1-201ENST00000453438 462 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 AL583843.1-201ENST00000456070 346 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 AL359273.1-201ENST00000510918 627 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 RN7SKP57-201ENST00000517248 293 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 MIR5696-201ENST00000578474 85 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 MIR5701-3-201ENST00000578890 82 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 MIR5701-1-201ENST00000585138 82 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 MIR5701-2-201ENST00000615634 82 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 MIR8057-201ENST00000620957 69 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 AC091953.5-201ENST00000622919 233 ntBASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 ZNF72P-201ENST00000425869 1908 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.188-201ENST00000363952 111 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.245-201ENST00000364493 95 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.314-201ENST00000365114 102 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.380-201ENST00000365663 111 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 DYNLT3P1-201ENST00000378574 347 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 RNU6-472P-201ENST00000384299 107 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 AL591034.2-201ENST00000402839 359 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 MIR1252-201ENST00000408861 65 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 PGBD4P6-201ENST00000421501 610 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 RPS15AP10-201ENST00000432472 382 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 RNU6-1037P-201ENST00000459571 107 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 RPL23AP45-201ENST00000476406 468 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 RPL22P13-201ENST00000493291 347 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 AC010265.1-201ENST00000513509 211 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 SNORA74D-201ENST00000516404 141 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 SNORA40.14-201ENST00000516543 86 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 AC131281.1-201ENST00000522984 164 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 AC009314.1-201ENST00000603871 304 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 AP000787.2-201ENST00000604432 568 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 Z98751.3-201ENST00000604447 521 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 AL079305.1-201ENST00000623159 3008 ntBASIC2.87□□□□□ -1.95
ZNF549Q6P9A3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 RPL9P7-201ENST00000330965 580 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 MIR422A-201ENST00000362286 90 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 RNU6-827P-201ENST00000365553 106 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.396-201ENST00000383949 103 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 MIR181A2-201ENST00000384863 110 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 AL627311.1-201ENST00000431514 115 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 AL513043.1-201ENST00000439124 535 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 RPL9P9-202ENST00000466501 579 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 RPL27AP5-201ENST00000469428 449 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 KC877373.1-201ENST00000479066 408 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 AC114801.2-201ENST00000503825 781 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 ACA59.1-201ENST00000515966 143 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.687-201ENST00000516558 91 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 RNU6-1271P-201ENST00000517049 105 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.715-201ENST00000517082 110 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 RNA5SP290-201ENST00000517133 127 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 HSBP1P1-201ENST00000555205 166 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 MIR3200-201ENST00000580767 85 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 AC016727.2-201ENST00000603988 621 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 AC136601.2-201ENST00000604356 474 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 AC007792.1-201ENST00000623023 402 ntBASIC2.86□□□□□ -1.95
ZNF549Q6P9A3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms