Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 RNA5SP25-201ENST00000410815 110 ntBASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 MTCO1P17-201ENST00000411522 491 ntBASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 AL359704.1-201ENST00000411586 781 ntBASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 AC009518.2-201ENST00000418056 731 ntBASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 AL953862.1-201ENST00000423016 168 ntBASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 MTCO1P44-201ENST00000441935 243 ntBASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 AL035666.1-201ENST00000446195 348 ntBASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 MTCYBP40-201ENST00000509390 1135 ntBASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 RNU6-965P-201ENST00000516721 96 ntBASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 MTND1P36-201ENST00000522384 936 ntBASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 Z82243.1-201ENST00000609432 473 ntBASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 AC104985.3-201ENST00000623479 597 ntBASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 AL136313.1-201ENST00000624804 202 ntBASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.09□□□□□ -2.24
SNAPC4Q5SXM2 RNU6-655P-201ENST00000362858 107 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 RNU6-414P-201ENST00000363705 104 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 RNU6-743P-201ENST00000364151 106 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 SNORD1A-201ENST00000364968 72 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 RNU6-1274P-201ENST00000384557 107 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 CBX3P9-201ENST00000402326 552 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 MIR1305-201ENST00000408300 86 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 UBE2V1P10-201ENST00000414685 269 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 MTCO3P5-201ENST00000433620 714 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 AC092628.1-201ENST00000436250 252 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 AL135790.2-201ENST00000437701 267 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 ZNF886P-201ENST00000450781 723 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 SNORA31.17-201ENST00000516953 127 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 RN7SKP256-201ENST00000517201 314 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 COPS8P3-201ENST00000526024 482 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 TRAV32-201ENST00000553993 340 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 AC005668.1-201ENST00000571142 476 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 Z69720.2-201ENST00000624755 279 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 AP003485.1-201ENST00000625093 753 ntBASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
SNAPC4Q5SXM2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SNAPC4Q5SXM2 AC010409.1-201ENST00000487382 476 ntBASIC1.07□□□□□ -2.24
SNAPC4Q5SXM2 OR8K2P-201ENST00000524645 927 ntBASIC1.07□□□□□ -2.24
SNAPC4Q5SXM2 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SNAPC4Q5SXM2 AC130454.1-201ENST00000622948 401 ntBASIC1.07□□□□□ -2.24
SNAPC4Q5SXM2 MIR6866-201ENST00000638146 69 ntBASIC1.07□□□□□ -2.24
SNAPC4Q5SXM2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SNAPC4Q5SXM2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SNAPC4Q5SXM2 RNU6-1210P-201ENST00000363775 107 ntBASIC1.06□□□□□ -2.24
SNAPC4Q5SXM2 SNORA4.3-201ENST00000365564 137 ntBASIC1.06□□□□□ -2.24
SNAPC4Q5SXM2 RNU6-166P-201ENST00000384371 107 ntBASIC1.06□□□□□ -2.24
SNAPC4Q5SXM2 Y_RNA.549-201ENST00000384657 102 ntBASIC1.06□□□□□ -2.24
SNAPC4Q5SXM2 MIR1267-201ENST00000408723 78 ntBASIC1.06□□□□□ -2.24
SNAPC4Q5SXM2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.06□□□□□ -2.24
SNAPC4Q5SXM2 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.06□□□□□ -2.24
SNAPC4Q5SXM2 MED28P2-201ENST00000475771 317 ntBASIC1.06□□□□□ -2.24
SNAPC4Q5SXM2 AP003122.4-201ENST00000530980 758 ntBASIC1.06□□□□□ -2.24
SNAPC4Q5SXM2 MIR4293-201ENST00000584305 78 ntBASIC1.06□□□□□ -2.24
SNAPC4Q5SXM2 BNIP3P27-201ENST00000599991 412 ntBASIC1.06□□□□□ -2.24
SNAPC4Q5SXM2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.06□□□□□ -2.24
SNAPC4Q5SXM2 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.06□□□□□ -2.24
SNAPC4Q5SXM2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 RNU6-944P-201ENST00000364023 107 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 RNA5SP493-201ENST00000364115 91 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 RNU6-160P-201ENST00000384591 107 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 MIR29B2-201ENST00000385055 81 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 RNA5SP63-201ENST00000391225 112 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 MTND4P3-201ENST00000417829 541 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 MTCO2P25-201ENST00000447065 681 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 RPS26P55-201ENST00000471178 356 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 AC079140.2-201ENST00000506193 142 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 AC103851.1-201ENST00000506833 274 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 DEFB108A-201ENST00000530110 222 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 AC018630.3-201ENST00000542637 96 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 AC137800.2-201ENST00000574375 120 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 MIR1273C-201ENST00000578669 77 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 BNIP3P26-201ENST00000600827 554 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 AC068880.4-201ENST00000623082 495 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 SNORD33-201ENST00000362761 85 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 RNU6-23P-201ENST00000363283 107 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 RNU6-487P-201ENST00000365430 104 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 RNU6-439P-201ENST00000384188 106 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 RNU6-360P-201ENST00000390944 104 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 RNA5SP390-201ENST00000410191 113 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 RNU6-1025P-201ENST00000410629 104 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 AC003071.1-201ENST00000451219 789 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 AC087477.1-201ENST00000465747 340 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 SNORA77B-201ENST00000578179 125 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 AC023932.2-201ENST00000603176 175 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 AC007792.1-201ENST00000623023 402 ntBASIC1.05□□□□□ -2.24
SNAPC4Q5SXM2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms