Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 AC021739.1-201ENST00000559631 174 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 MIR3149-201ENST00000584629 83 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 AL161423.1-201ENST00000613700 262 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 AL162373.1-201ENST00000620433 407 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 AC010680.1-201ENST00000590024 3590 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 Y_RNA.2-201ENST00000362330 96 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 SNORD62.1-201ENST00000362541 86 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 Y_RNA.252-201ENST00000364556 101 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 AC117470.1-201ENST00000381974 330 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 RNU6-301P-201ENST00000384277 107 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 MTCYBP9-201ENST00000431021 303 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 HIGD1AP2-201ENST00000446367 280 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 SNORD5.1-201ENST00000458800 75 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 AC018437.1-201ENST00000492214 406 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 SCARNA16.2-201ENST00000516520 172 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 SNORA70.19-201ENST00000516717 90 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 AC011494.1-201ENST00000596454 237 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 AC004832.5-201ENST00000608677 401 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 AC097372.5-201ENST00000623665 376 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 AC090617.7-201ENST00000623952 126 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 SCARNA4-202ENST00000625402 129 ntBASIC3.34□□□□□ -1.87
SLC44A4Q53GD3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SLC44A4Q53GD3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SLC44A4Q53GD3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SLC44A4Q53GD3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 RNU6-942P-201ENST00000363002 107 ntBASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 FTH1P15-201ENST00000406984 280 ntBASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 HMGB3P2-201ENST00000411913 584 ntBASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 AC008267.5-201ENST00000424928 265 ntBASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 HMGN2P20-201ENST00000437531 273 ntBASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 RNU7-23P-201ENST00000459465 62 ntBASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 AC022493.2-201ENST00000506122 481 ntBASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 AC008885.1-201ENST00000514930 301 ntBASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 MTCO2P24-201ENST00000515611 426 ntBASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 SNORA43.2-201ENST00000516652 128 ntBASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 AC245166.1-201ENST00000521012 253 ntBASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 AP004607.1-201ENST00000524456 203 ntBASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 MIR4672-201ENST00000583126 81 ntBASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 AC009314.1-201ENST00000603871 304 ntBASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SLC44A4Q53GD3 GABRG2-229ENST00000641017 3628 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 Y_RNA.47-201ENST00000362697 108 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 Y_RNA.80-201ENST00000362996 102 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 SNORD56.3-201ENST00000363507 71 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 Y_RNA.193-201ENST00000363979 102 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 RNU6-1280P-201ENST00000365211 107 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 Y_RNA.485-201ENST00000384395 102 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 RNU6-325P-201ENST00000411132 105 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 AC243428.1-201ENST00000421099 264 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 HMGN1P18-201ENST00000457642 277 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 AK3P2-201ENST00000507976 429 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 SNORA31.21-201ENST00000517180 77 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 NACAP3-201ENST00000552100 481 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 VN1R107P-201ENST00000601784 209 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 7SK.7-201ENST00000603504 247 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 AC090425.1-201ENST00000610007 140 ntBASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC44A4Q53GD3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 RNU6-858P-201ENST00000362436 107 ntBASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 RNU6-490P-201ENST00000362985 107 ntBASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 RNU6-1317P-201ENST00000364582 104 ntBASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 SNORA14A-201ENST00000364773 135 ntBASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 RNU6-842P-201ENST00000384269 107 ntBASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 Y_RNA.645-201ENST00000391229 102 ntBASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 AL030996.1-201ENST00000411430 235 ntBASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 RPL23AP50-201ENST00000434149 455 ntBASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 AC244505.4-201ENST00000434905 287 ntBASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 SSXP5-201ENST00000443473 287 ntBASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 AC006483.1-201ENST00000487308 313 ntBASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 AC116655.1-201ENST00000508324 901 ntBASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 AC104695.3-201ENST00000604052 296 ntBASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 MIR3199-2-201ENST00000636243 86 ntBASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 U4.7-201ENST00000638126 106 ntBASIC3.31□□□□□ -1.88
SLC44A4Q53GD3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms