Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 AC005741.1-201ENST00000511094 432 ntBASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 AC004486.1-201ENST00000546846 233 ntBASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 MIR3200-201ENST00000580767 85 ntBASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 AC124303.1-201ENST00000605703 360 ntBASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 RNU6-85P-201ENST00000605989 107 ntBASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 AL137790.1-201ENST00000634283 177 ntBASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.34□□□□□ -2.04
SNAI3Q3KNW1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
SNAI3Q3KNW1 ADAM3A-203ENST00000461344 2157 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 RNU6-1188P-201ENST00000363795 107 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 RNU6-593P-201ENST00000364716 112 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 RNU6-1329P-201ENST00000365664 107 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 RNU6-601P-201ENST00000384540 107 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 SNORA40C-201ENST00000391285 128 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 RNA5SP21-201ENST00000410917 96 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 RNU6-1304P-201ENST00000411374 106 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 AC096649.2-201ENST00000416186 393 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 UBE2V1P4-201ENST00000425374 344 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 BRK1P2-201ENST00000442875 223 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 OSTCP8-201ENST00000445117 448 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 Y_RNA.639-201ENST00000458981 102 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 AC027575.1-201ENST00000481064 460 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 AC096745.1-201ENST00000509945 370 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 RNU5F-8P-201ENST00000515941 111 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 RNU6-1170P-201ENST00000515974 106 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 SCARNA15.1-201ENST00000516384 125 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 MIR5690-201ENST00000583739 73 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 MIR4635-201ENST00000583759 79 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 AL133215.3-201ENST00000609801 448 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 AC010378.1-201ENST00000619270 362 ntBASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.33□□□□□ -2.04
SNAI3Q3KNW1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 Y_RNA.187-201ENST00000363918 113 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 SNORD14B-201ENST00000364533 90 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 Y_RNA.326-201ENST00000365176 113 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 RNU6-166P-201ENST00000384371 107 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AL356057.3-201ENST00000402607 340 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 Y_RNA.623-201ENST00000411128 95 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AL118496.2-201ENST00000448300 230 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AP000705.1-201ENST00000454567 350 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 ELOCP24-201ENST00000456370 334 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AC128713.1-201ENST00000471495 306 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AC090096.1-201ENST00000489168 390 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AC116337.1-201ENST00000509680 687 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AC026782.1-201ENST00000512952 449 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 RNU6-1016P-201ENST00000516689 94 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 SNORA31.18-201ENST00000517043 134 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 SCARNA11.3-201ENST00000517276 130 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 ELOCP31-201ENST00000540463 467 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AL121821.2-201ENST00000556081 394 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AC020661.2-201ENST00000560114 134 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 MIR3670-2-201ENST00000582974 65 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 MIR3670-1-201ENST00000584160 65 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 MIR3670-3-201ENST00000584855 65 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AC022432.1-201ENST00000595739 310 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 RPL12P50-201ENST00000603116 116 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AL355598.1-201ENST00000604169 202 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 ELOCP5-201ENST00000604924 333 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AC123912.5-201ENST00000605470 343 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AL080274.1-201ENST00000605565 220 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 MIR3670-4-201ENST00000612260 65 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 MIR6128-201ENST00000615528 109 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AC090971.5-201ENST00000621102 293 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 AC134503.1-201ENST00000633048 54 ntBASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.32□□□□□ -2.04
SNAI3Q3KNW1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms