Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AC098848.2-201ENST00000588023 330 ntBASIC1.6□□□□□ -2.15
CDH17Q12864 Z82243.1-201ENST00000609432 473 ntBASIC1.6□□□□□ -2.15
CDH17Q12864 uc_338.5-201ENST00000611839 155 ntBASIC1.6□□□□□ -2.15
CDH17Q12864 AP001506.1-201ENST00000615444 211 ntBASIC1.6□□□□□ -2.15
CDH17Q12864 AC091304.6-201ENST00000619761 202 ntBASIC1.6□□□□□ -2.15
CDH17Q12864 FARSBP1-201ENST00000435808 1778 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
CDH17Q12864 RNU6-212P-201ENST00000362642 104 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 RNU6-546P-201ENST00000383991 107 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 RNU6-997P-201ENST00000384725 107 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 RNU11-3P-201ENST00000391111 133 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 RNU2-3P-201ENST00000410144 191 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 RNU2-23P-201ENST00000410545 195 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 RNU2-48P-201ENST00000410694 191 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 RNU6-607P-201ENST00000411283 108 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 OR6C66P-201ENST00000414917 930 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH17Q12864 MTND2P18-201ENST00000419962 1030 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.59□□□□□ -2.15
CDH17Q12864 BX510359.4-201ENST00000423750 193 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 UBE2V1P4-201ENST00000425374 344 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.59□□□□□ -2.15
CDH17Q12864 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.59□□□□□ -2.15
CDH17Q12864 snoU13.14-201ENST00000459372 104 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 SNORD42A-201ENST00000459584 64 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH17Q12864 AC008834.1-201ENST00000511612 175 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 RNU6-970P-201ENST00000516312 107 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 Y_RNA.717-201ENST00000517106 92 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH17Q12864 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.59□□□□□ -2.15
CDH17Q12864 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH17Q12864 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
CDH17Q12864 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH17Q12864 AC012414.6-201ENST00000568241 401 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 AL670379.2-201ENST00000604983 252 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 AL353997.5-201ENST00000618886 171 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 AC011155.2-201ENST00000623202 216 ntBASIC1.59□□□□□ -2.15
CDH17Q12864 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 RNU6-655P-201ENST00000362858 107 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 RNU6-78P-201ENST00000362897 107 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 SNORD56.1-201ENST00000362913 68 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 Y_RNA.140-201ENST00000363474 103 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 RNU6-116P-201ENST00000384042 109 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CDH17Q12864 RNU6-482P-201ENST00000391068 107 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 SNORA26.8-201ENST00000391306 124 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 RAP1BP3-201ENST00000407180 549 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.58□□□□□ -2.16
CDH17Q12864 CYCSP33-201ENST00000414485 327 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 RPL31P35-201ENST00000431058 377 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 AL365400.1-201ENST00000431854 640 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 AC079781.2-201ENST00000446424 169 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.58□□□□□ -2.16
CDH17Q12864 AC006026.2-201ENST00000457376 180 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 AC027575.1-201ENST00000481064 460 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 MTCYBP40-201ENST00000509390 1135 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 SNORD27.1-201ENST00000516319 72 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 RNU6-410P-201ENST00000517006 107 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 SNORA44.1-201ENST00000517031 108 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 AP003392.2-201ENST00000527269 208 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.58□□□□□ -2.16
CDH17Q12864 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.58□□□□□ -2.16
CDH17Q12864 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.58□□□□□ -2.16
CDH17Q12864 MIR4285-201ENST00000581001 85 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 MIR4775-201ENST00000581168 75 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 CLIC4P2-201ENST00000601934 717 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 BX248123.2-201ENST00000606318 124 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 AC026585.1-201ENST00000619582 524 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.58□□□□□ -2.16
CDH17Q12864 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.58□□□□□ -2.16
CDH17Q12864 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.58□□□□□ -2.16
CDH17Q12864 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CDH17Q12864 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.57□□□□□ -2.16
CDH17Q12864 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.57□□□□□ -2.16
CDH17Q12864 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CDH17Q12864 RNU6-1210P-201ENST00000363775 107 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 SNORA62.1-201ENST00000364287 154 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 SNORD14D-201ENST00000384390 87 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 MIR934-201ENST00000401241 83 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 CBX3P9-201ENST00000402326 552 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 MIR1262-201ENST00000408276 93 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 RNU6-248P-201ENST00000410720 107 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.57□□□□□ -2.16
CDH17Q12864 CYCSP49-201ENST00000420810 319 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 GPR143P-201ENST00000434155 205 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.57□□□□□ -2.16
CDH17Q12864 MTND2P4-201ENST00000445034 1004 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.57□□□□□ -2.16
CDH17Q12864 PRELID3BP1-201ENST00000457142 540 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 AL162395.1-201ENST00000457882 422 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.57□□□□□ -2.16
CDH17Q12864 RNU1-98P-201ENST00000458992 160 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 RNA5SP269-201ENST00000459032 137 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 RPL30P12-201ENST00000474666 353 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.57□□□□□ -2.16
CDH17Q12864 AC096745.1-201ENST00000509945 370 ntBASIC1.57□□□□□ -2.16
CDH17Q12864 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms