Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 MIR200A-201ENST00000384875 90 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGXB3Q12766 HSPE1P9-201ENST00000440046 311 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 MTND3P4-201ENST00000453537 303 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.23□□□□□ -2.37
HMGXB3Q12766 RPL7P43-201ENST00000478876 753 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 AC116655.1-201ENST00000508324 901 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 AC093259.1-201ENST00000509755 300 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.23□□□□□ -2.37
HMGXB3Q12766 RNA5SP134-201ENST00000516492 96 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGXB3Q12766 MIR3664-201ENST00000579074 99 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 BNIP3P24-201ENST00000593398 557 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 AC012065.4-201ENST00000602445 679 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 AC091057.3-201ENST00000602684 733 ntBASIC0.23□□□□□ -2.37
HMGXB3Q12766 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
HMGXB3Q12766 RNU6-348P-201ENST00000384386 107 ntBASIC0.22□□□□□ -2.37
HMGXB3Q12766 RNU6-296P-201ENST00000384608 107 ntBASIC0.22□□□□□ -2.37
HMGXB3Q12766 RPL21P111-201ENST00000418453 477 ntBASIC0.22□□□□□ -2.37
HMGXB3Q12766 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.22□□□□□ -2.37
HMGXB3Q12766 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.22□□□□□ -2.37
HMGXB3Q12766 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.22□□□□□ -2.37
HMGXB3Q12766 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.22□□□□□ -2.37
HMGXB3Q12766 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.22□□□□□ -2.37
HMGXB3Q12766 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.22□□□□□ -2.37
HMGXB3Q12766 AC010631.1-201ENST00000474150 156 ntBASIC0.22□□□□□ -2.37
HMGXB3Q12766 AC025423.5-201ENST00000550230 219 ntBASIC0.22□□□□□ -2.37
HMGXB3Q12766 AC093519.1-201ENST00000566109 298 ntBASIC0.22□□□□□ -2.37
HMGXB3Q12766 AC015688.6-201ENST00000577737 104 ntBASIC0.22□□□□□ -2.37
HMGXB3Q12766 MIR3169-201ENST00000578032 83 ntBASIC0.22□□□□□ -2.37
HMGXB3Q12766 AC115989.2-201ENST00000578640 563 ntBASIC0.22□□□□□ -2.37
HMGXB3Q12766 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.22□□□□□ -2.37
HMGXB3Q12766 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
HMGXB3Q12766 UBE2V1P11-201ENST00000411559 285 ntBASIC0.21□□□□□ -2.38
HMGXB3Q12766 RPS3AP1-201ENST00000413190 320 ntBASIC0.21□□□□□ -2.38
HMGXB3Q12766 AC008267.5-201ENST00000424928 265 ntBASIC0.21□□□□□ -2.38
HMGXB3Q12766 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.21□□□□□ -2.38
HMGXB3Q12766 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.21□□□□□ -2.38
HMGXB3Q12766 RPL23AP54-201ENST00000495129 419 ntBASIC0.21□□□□□ -2.38
HMGXB3Q12766 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.21□□□□□ -2.38
HMGXB3Q12766 MTCYBP40-201ENST00000509390 1135 ntBASIC0.21□□□□□ -2.38
HMGXB3Q12766 AC093249.1-201ENST00000567049 203 ntBASIC0.21□□□□□ -2.38
HMGXB3Q12766 MIR4645-201ENST00000583158 77 ntBASIC0.21□□□□□ -2.38
HMGXB3Q12766 AC022432.1-201ENST00000595739 310 ntBASIC0.21□□□□□ -2.38
HMGXB3Q12766 uc_338.15-201ENST00000615470 191 ntBASIC0.21□□□□□ -2.38
HMGXB3Q12766 AC009509.4-201ENST00000619202 509 ntBASIC0.21□□□□□ -2.38
HMGXB3Q12766 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.21□□□□□ -2.38
HMGXB3Q12766 MIR6516-201ENST00000630554 81 ntBASIC0.21□□□□□ -2.38
HMGXB3Q12766 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
HMGXB3Q12766 SGO1P1-201ENST00000603525 1447 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 SNORD49B-201ENST00000365172 72 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 Y_RNA.559-201ENST00000384686 107 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 MIR7-1-201ENST00000384871 110 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 MIR605-201ENST00000385078 83 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 VPS26BP1-201ENST00000417155 755 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 AC093422.3-201ENST00000428506 305 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 AL929288.2-201ENST00000446368 407 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 AL050341.1-201ENST00000447743 313 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.2□□□□□ -2.38
HMGXB3Q12766 AC002350.1-201ENST00000490759 375 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 AC008628.1-201ENST00000508663 265 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 RNU2-53P-201ENST00000516257 147 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 AC090502.2-201ENST00000549267 280 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 AC026371.1-201ENST00000551867 419 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 MIR4667-201ENST00000578933 66 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 AC073410.2-201ENST00000603240 332 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 AC107952.2-201ENST00000606048 486 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 AC098614.4-201ENST00000607601 462 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 AL365434.2-201ENST00000607979 234 ntBASIC0.2□□□□□ -2.38
HMGXB3Q12766 RNU6-743P-201ENST00000364151 106 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 RNU4-12P-201ENST00000365233 139 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 RNU1-39P-201ENST00000383897 165 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
HMGXB3Q12766 BTF3L4P3-201ENST00000418879 476 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
HMGXB3Q12766 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.19□□□□□ -2.38
HMGXB3Q12766 AC092170.1-201ENST00000440211 356 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 AC010460.2-201ENST00000509054 677 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 AC048346.1-201ENST00000510247 144 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 RNA5SP168-201ENST00000516642 112 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.19□□□□□ -2.38
HMGXB3Q12766 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.19□□□□□ -2.38
HMGXB3Q12766 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.19□□□□□ -2.38
HMGXB3Q12766 HMGB1P33-201ENST00000563485 527 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 AC091489.2-201ENST00000566263 604 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 LARP7P2-201ENST00000575306 125 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 MIR5094-201ENST00000578766 85 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 AC105129.3-201ENST00000605455 485 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 AC040896.1-201ENST00000613819 479 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 AC123767.1-202ENST00000620407 817 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 AC093648.1-201ENST00000623546 606 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 AC080188.3-201ENST00000624842 748 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
HMGXB3Q12766 FARSBP1-201ENST00000435808 1778 ntBASIC0.19□□□□□ -2.38
HMGXB3Q12766 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.18□□□□□ -2.38
HMGXB3Q12766 AL391994.1-201ENST00000254724 282 ntBASIC0.18□□□□□ -2.38
HMGXB3Q12766 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
HMGXB3Q12766 MIR16-1-201ENST00000385271 89 ntBASIC0.18□□□□□ -2.38
HMGXB3Q12766 AC138623.1-201ENST00000418060 216 ntBASIC0.18□□□□□ -2.38
HMGXB3Q12766 CETN4P-201ENST00000432407 469 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms