Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 AL121917.1-203ENST00000605534 577 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 AL158063.1-201ENST00000615349 536 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CSTF1Q05048 AC138649.3-201ENST00000622154 254 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.97□□□□□ -2.09
CSTF1Q05048 RNU6-529P-201ENST00000363383 104 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 RNU6-527P-201ENST00000363425 104 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 Y_RNA.796-201ENST00000364268 102 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 Y_RNA.799-201ENST00000364992 102 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 RNA5SP138-201ENST00000365098 114 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 U8.10-201ENST00000384260 133 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 Y_RNA.466-201ENST00000384294 113 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 MIR489-201ENST00000384923 84 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 RNU4-62P-201ENST00000410125 130 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 RNU6-248P-201ENST00000410720 107 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 BTF3L4P1-201ENST00000413813 468 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 DLGAP5P1-201ENST00000430307 464 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.96□□□□□ -2.1
CSTF1Q05048 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.96□□□□□ -2.1
CSTF1Q05048 AC003989.2-201ENST00000440224 169 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 USP9YP8-201ENST00000441913 500 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.96□□□□□ -2.1
CSTF1Q05048 MTND1P27-201ENST00000451117 902 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.96□□□□□ -2.1
CSTF1Q05048 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.96□□□□□ -2.1
CSTF1Q05048 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.96□□□□□ -2.1
CSTF1Q05048 SNORA43.2-201ENST00000516652 128 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 Y_RNA.695-201ENST00000516715 107 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.96□□□□□ -2.1
CSTF1Q05048 CR383656.8-201ENST00000549046 145 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.96□□□□□ -2.1
CSTF1Q05048 AC006362.1-201ENST00000567392 174 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 AC040904.1-201ENST00000590850 223 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 AC073539.2-201ENST00000597113 165 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.96□□□□□ -2.1
CSTF1Q05048 AL590229.1-201ENST00000603497 542 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 SNRPGP19-201ENST00000603826 189 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 MIR8081-201ENST00000611533 95 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 AL162373.1-201ENST00000620433 407 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 SDR42E1P4-201ENST00000620894 481 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 AC097372.5-201ENST00000623665 376 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CSTF1Q05048 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.96□□□□□ -2.1
CSTF1Q05048 WWP1P1-201ENST00000466609 2769 ntBASIC1.96□□□□□ -2.1
CSTF1Q05048 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CSTF1Q05048 RNA5SP160-201ENST00000364866 120 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 RNU5E-7P-201ENST00000365290 117 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 Y_RNA.553-201ENST00000384670 102 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 MIR518E-201ENST00000385252 88 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 RNU6-550P-201ENST00000391057 101 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 SNORA46.1-201ENST00000391069 153 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 DEFB108C-201ENST00000400154 252 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 RNA5SP338-201ENST00000410495 85 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.95□□□□□ -2.1
CSTF1Q05048 AP1B1P2-201ENST00000416196 106 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 AC074117.2-201ENST00000417130 397 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.95□□□□□ -2.1
CSTF1Q05048 USP9YP14-201ENST00000430663 563 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 AC117503.1-201ENST00000472241 394 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 HMGB1P35-201ENST00000503360 598 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.95□□□□□ -2.1
CSTF1Q05048 AC010424.1-201ENST00000506336 297 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 RNU1-40P-201ENST00000516816 164 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 RNU1-97P-201ENST00000516872 164 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 SNORA48.11-201ENST00000517015 89 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 RNA5SP503-201ENST00000517047 117 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 RNU6-685P-201ENST00000517088 95 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 SNORA31.23-201ENST00000517219 133 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.95□□□□□ -2.1
CSTF1Q05048 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.95□□□□□ -2.1
CSTF1Q05048 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.95□□□□□ -2.1
CSTF1Q05048 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.95□□□□□ -2.1
CSTF1Q05048 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 AC245014.2-201ENST00000603689 287 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 AC246785.4-201ENST00000605374 287 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 AC098657.3-201ENST00000620434 263 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 AC011155.2-201ENST00000623202 216 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 ZNF702P-202ENST00000434269 1966 ntBASIC1.95□□□□□ -2.1
CSTF1Q05048 snoU2_19.1-201ENST00000362361 80 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 RNU6-655P-201ENST00000362858 107 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 Y_RNA.116-201ENST00000363292 103 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 RNU6-282P-201ENST00000365357 103 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 AL627390.1-201ENST00000396055 340 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 HMGN2P39-201ENST00000398005 273 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 RAP1BP3-201ENST00000407180 549 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.94□□□□□ -2.1
CSTF1Q05048 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 DNAJC19P4-201ENST00000440115 345 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 AC092473.1-201ENST00000441098 221 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 AC244505.5-201ENST00000443639 207 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 RPL23AP7-203ENST00000449021 469 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 AL021397.1-201ENST00000451806 248 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 SNORD42A-201ENST00000459584 64 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 SNRPGP7-201ENST00000469016 106 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 MIR514B-201ENST00000516774 80 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 RNA5SP137-201ENST00000516833 135 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 AC233702.2-202ENST00000562547 291 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms