Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.11□□□□□ -2.39
SCN7AQ01118 RNU6-840P-201ENST00000517275 65 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.11□□□□□ -2.39
SCN7AQ01118 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
SCN7AQ01118 AC025423.5-201ENST00000550230 219 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 AC137800.2-201ENST00000574375 120 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 VN1R83P-201ENST00000595685 445 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 AL355598.1-201ENST00000604169 202 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 RNU6-87P-201ENST00000607561 108 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 AP001596.2-201ENST00000608410 312 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 AC080188.3-201ENST00000624842 748 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.11□□□□□ -2.39
SCN7AQ01118 MIR605-201ENST00000385078 83 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 RNU6-1176P-201ENST00000390955 107 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 RPS3AP36-201ENST00000398190 775 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 AC138623.1-201ENST00000418060 216 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.11□□□□□ -2.39
SCN7AQ01118 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.11□□□□□ -2.39
SCN7AQ01118 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.11□□□□□ -2.39
SCN7AQ01118 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.11□□□□□ -2.39
SCN7AQ01118 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.11□□□□□ -2.39
SCN7AQ01118 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.11□□□□□ -2.39
SCN7AQ01118 PCMTD1P7-201ENST00000634506 357 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 RNU6-23P-201ENST00000363283 107 ntBASIC0.1□□□□□ -2.39
SCN7AQ01118 RNU6-1327P-201ENST00000365302 105 ntBASIC0.1□□□□□ -2.39
SCN7AQ01118 MIR16-1-201ENST00000385271 89 ntBASIC0.1□□□□□ -2.39
SCN7AQ01118 SNORD12-201ENST00000391002 90 ntBASIC0.1□□□□□ -2.39
SCN7AQ01118 CETN4P-201ENST00000432407 469 ntBASIC0.1□□□□□ -2.39
SCN7AQ01118 MTND2P21-201ENST00000436242 1042 ntBASIC0.1□□□□□ -2.39
SCN7AQ01118 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.1□□□□□ -2.39
SCN7AQ01118 MTND2P4-201ENST00000445034 1004 ntBASIC0.1□□□□□ -2.39
SCN7AQ01118 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.1□□□□□ -2.39
SCN7AQ01118 RNA5SP481-201ENST00000516814 122 ntBASIC0.1□□□□□ -2.39
SCN7AQ01118 AP003392.2-201ENST00000527269 208 ntBASIC0.1□□□□□ -2.39
SCN7AQ01118 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.1□□□□□ -2.39
SCN7AQ01118 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.1□□□□□ -2.39
SCN7AQ01118 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.1□□□□□ -2.39
SCN7AQ01118 AC091489.2-201ENST00000566263 604 ntBASIC0.1□□□□□ -2.39
SCN7AQ01118 AC015688.6-201ENST00000577737 104 ntBASIC0.1□□□□□ -2.39
SCN7AQ01118 AC025627.3-201ENST00000582078 182 ntBASIC0.1□□□□□ -2.39
SCN7AQ01118 AL158163.2-201ENST00000619110 700 ntBASIC0.1□□□□□ -2.39
SCN7AQ01118 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.1□□□□□ -2.39
SCN7AQ01118 DBF4P1-201ENST00000412976 1892 ntBASIC0.1□□□□□ -2.39
SCN7AQ01118 RNU6-944P-201ENST00000364023 107 ntBASIC0.09□□□□□ -2.39
SCN7AQ01118 RNU6-1019P-201ENST00000364424 107 ntBASIC0.09□□□□□ -2.39
SCN7AQ01118 RNA5SP331-201ENST00000364986 107 ntBASIC0.09□□□□□ -2.39
SCN7AQ01118 MIR942-201ENST00000401111 86 ntBASIC0.09□□□□□ -2.39
SCN7AQ01118 ISCA1P1-201ENST00000426679 387 ntBASIC0.09□□□□□ -2.39
SCN7AQ01118 AC093422.3-201ENST00000428506 305 ntBASIC0.09□□□□□ -2.39
SCN7AQ01118 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.09□□□□□ -2.39
SCN7AQ01118 GPM6BP2-201ENST00000432046 144 ntBASIC0.09□□□□□ -2.39
SCN7AQ01118 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.09□□□□□ -2.39
SCN7AQ01118 GPM6BP1-201ENST00000446387 144 ntBASIC0.09□□□□□ -2.39
SCN7AQ01118 AC092001.1-201ENST00000453012 261 ntBASIC0.09□□□□□ -2.39
SCN7AQ01118 MTCO1P31-201ENST00000506355 492 ntBASIC0.09□□□□□ -2.39
SCN7AQ01118 AC010460.2-201ENST00000509054 677 ntBASIC0.09□□□□□ -2.39
SCN7AQ01118 RNU6-1183P-201ENST00000517054 60 ntBASIC0.09□□□□□ -2.39
SCN7AQ01118 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.09□□□□□ -2.39
SCN7AQ01118 HMGB1P33-201ENST00000563485 527 ntBASIC0.09□□□□□ -2.39
SCN7AQ01118 AC009269.6-201ENST00000621778 588 ntBASIC0.09□□□□□ -2.39
SCN7AQ01118 SNORD116-23-201ENST00000384645 92 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.08□□□□□ -2.4
SCN7AQ01118 RNU1-131P-201ENST00000458943 161 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 RNU6-965P-201ENST00000516721 96 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.08□□□□□ -2.4
SCN7AQ01118 AC105148.1-201ENST00000604961 409 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 AL353765.1-201ENST00000605514 183 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.08□□□□□ -2.4
SCN7AQ01118 Y_RNA.170-201ENST00000363746 110 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 RNA5SP368-201ENST00000364298 116 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 RNU6-637P-201ENST00000384050 107 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 AL133475.1-201ENST00000404414 305 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 AL356776.1-201ENST00000406574 447 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 MTATP6P27-201ENST00000416987 621 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.08□□□□□ -2.4
SCN7AQ01118 AC012308.1-201ENST00000451232 178 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 AC130509.1-201ENST00000464158 433 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.08□□□□□ -2.4
SCN7AQ01118 SNORD79.1-201ENST00000516069 84 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 RNU6-390P-201ENST00000516259 103 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 AC093249.1-201ENST00000567049 203 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.08□□□□□ -2.4
SCN7AQ01118 AP001981.2-201ENST00000603241 418 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 AC096586.1-201ENST00000610267 561 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 RMST_4.1-201ENST00000616886 107 ntBASIC0.08□□□□□ -2.4
SCN7AQ01118 AC010615.1-201ENST00000594254 1764 ntBASIC0.07□□□□□ -2.4
SCN7AQ01118 AC023934.1-201ENST00000574529 2389 ntBASIC0.07□□□□□ -2.4
SCN7AQ01118 LINC02555-201ENST00000563933 1951 ntBASIC0.07□□□□□ -2.4
SCN7AQ01118 Y_RNA.303-201ENST00000364998 94 ntBASIC0.07□□□□□ -2.4
SCN7AQ01118 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.07□□□□□ -2.4
SCN7AQ01118 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.07□□□□□ -2.4
SCN7AQ01118 MTCO3P1-205ENST00000422088 832 ntBASIC0.07□□□□□ -2.4
SCN7AQ01118 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.07□□□□□ -2.4
SCN7AQ01118 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.07□□□□□ -2.4
SCN7AQ01118 MTCO1P57-201ENST00000432182 261 ntBASIC0.07□□□□□ -2.4
SCN7AQ01118 AL929288.2-201ENST00000446368 407 ntBASIC0.07□□□□□ -2.4
SCN7AQ01118 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.07□□□□□ -2.4
SCN7AQ01118 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms