Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MTCYBP1-201ENST00000454315 1119 ntBASIC0□□□□□ -2.41
HSPG2P98160 RPL36AP48-201ENST00000485521 314 ntBASIC0□□□□□ -2.41
HSPG2P98160 SNORA31.17-201ENST00000516953 127 ntBASIC0□□□□□ -2.41
HSPG2P98160 HMGB1P33-201ENST00000563485 527 ntBASIC0□□□□□ -2.41
HSPG2P98160 AC090079.2-201ENST00000575289 768 ntBASIC0□□□□□ -2.41
HSPG2P98160 AC069114.2-201ENST00000604699 304 ntBASIC0□□□□□ -2.41
HSPG2P98160 AC004832.4-201ENST00000608952 331 ntBASIC0□□□□□ -2.41
HSPG2P98160 AC009237.15-201ENST00000610252 501 ntBASIC0□□□□□ -2.41
HSPG2P98160 MIR8064-201ENST00000612863 90 ntBASIC0□□□□□ -2.41
HSPG2P98160 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0□□□□□ -2.41
HSPG2P98160 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0□□□□□ -2.41
HSPG2P98160 RNA5SP214-201ENST00000363378 118 ntBASIC0□□□□□ -2.41
HSPG2P98160 RNU6-674P-201ENST00000363831 107 ntBASIC0□□□□□ -2.41
HSPG2P98160 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0□□□□□ -2.41
HSPG2P98160 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0□□□□□ -2.41
HSPG2P98160 SNORD116-30-201ENST00000516468 85 ntBASIC0□□□□□ -2.41
HSPG2P98160 AC104417.1-201ENST00000523974 751 ntBASIC0□□□□□ -2.41
HSPG2P98160 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0□□□□□ -2.41
HSPG2P98160 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0□□□□□ -2.41
HSPG2P98160 AC021506.2-201ENST00000612354 169 ntBASIC0□□□□□ -2.41
HSPG2P98160 5S_rRNA.11-201ENST00000618635 84 ntBASIC0□□□□□ -2.41
HSPG2P98160 MIR4275-201ENST00000636486 87 ntBASIC0□□□□□ -2.41
HSPG2P98160 ANKRD26P2-201ENST00000445530 1710 ntBASIC-0□□□□□ -2.41
HSPG2P98160 MIR1283-2-201ENST00000408621 87 ntBASIC-0□□□□□ -2.41
HSPG2P98160 MTCYBP38-201ENST00000417160 1123 ntBASIC-0□□□□□ -2.41
HSPG2P98160 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0□□□□□ -2.41
HSPG2P98160 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0□□□□□ -2.41
HSPG2P98160 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0□□□□□ -2.41
HSPG2P98160 AC002381.1-201ENST00000447049 280 ntBASIC-0□□□□□ -2.41
HSPG2P98160 AC013267.1-201ENST00000458227 267 ntBASIC-0□□□□□ -2.41
HSPG2P98160 AC002350.1-201ENST00000490759 375 ntBASIC-0□□□□□ -2.41
HSPG2P98160 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0□□□□□ -2.41
HSPG2P98160 AC116655.1-201ENST00000508324 901 ntBASIC-0□□□□□ -2.41
HSPG2P98160 AC079140.3-201ENST00000511111 550 ntBASIC-0□□□□□ -2.41
HSPG2P98160 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC-0□□□□□ -2.41
HSPG2P98160 AC116347.2-201ENST00000514912 523 ntBASIC-0□□□□□ -2.41
HSPG2P98160 RNA5SP481-201ENST00000516814 122 ntBASIC-0□□□□□ -2.41
HSPG2P98160 ACA59.2-201ENST00000517061 156 ntBASIC-0□□□□□ -2.41
HSPG2P98160 AC126365.2-201ENST00000580630 379 ntBASIC-0□□□□□ -2.41
HSPG2P98160 AP000860.1-201ENST00000605250 559 ntBASIC-0□□□□□ -2.41
HSPG2P98160 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC-0□□□□□ -2.41
HSPG2P98160 AC090625.1-201ENST00000357130 210 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 SNORD114-24-201ENST00000365029 72 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.01□□□□□ -2.41
HSPG2P98160 MIR29B2-201ENST00000385055 81 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 RNU6-233P-201ENST00000410845 141 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC010385.1-201ENST00000412374 256 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AL512637.2-201ENST00000431287 1256 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.01□□□□□ -2.41
HSPG2P98160 PTGES3P1-201ENST00000439531 483 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.01□□□□□ -2.41
HSPG2P98160 RPL26P26-201ENST00000480251 434 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 PDCD5P2-201ENST00000507570 312 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 RNU6-782P-201ENST00000516852 104 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-0.01□□□□□ -2.41
HSPG2P98160 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.01□□□□□ -2.41
HSPG2P98160 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.01□□□□□ -2.41
HSPG2P98160 AC016542.1-201ENST00000608259 493 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 RNY4P6-201ENST00000363667 96 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-0.01□□□□□ -2.41
HSPG2P98160 AL353691.1-201ENST00000451332 387 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 U8.21-201ENST00000459536 136 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-0.01□□□□□ -2.41
HSPG2P98160 RNU6-927P-201ENST00000516199 100 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 RNU6-1183P-201ENST00000517054 60 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 SNORA76.2-201ENST00000517095 137 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 RNU6-667P-201ENST00000517186 102 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.01□□□□□ -2.41
HSPG2P98160 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.01□□□□□ -2.41
HSPG2P98160 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.01□□□□□ -2.41
HSPG2P98160 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.01□□□□□ -2.41
HSPG2P98160 MIR4764-201ENST00000580680 88 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC092106.3-201ENST00000611308 722 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC068647.2-201ENST00000637380 353 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 MIR3529-201ENST00000637713 78 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
HSPG2P98160 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
HSPG2P98160 AL109755.1-201ENST00000401791 649 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.01□□□□□ -2.41
HSPG2P98160 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC-0.01□□□□□ -2.41
HSPG2P98160 MTCO2P12-201ENST00000427426 682 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 RPS15AP9-201ENST00000439856 381 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 MTND4P19-201ENST00000446659 478 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 snoU13.25-201ENST00000458945 104 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.01□□□□□ -2.41
HSPG2P98160 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC-0.01□□□□□ -2.41
HSPG2P98160 AL671309.1-201ENST00000603750 544 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 PART1_2.1-201ENST00000612397 250 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC093913.1-201ENST00000614178 329 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 MIR6134-201ENST00000617606 109 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.01□□□□□ -2.41
HSPG2P98160 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
HSPG2P98160 RNU4-79P-201ENST00000362764 141 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 RNU6-944P-201ENST00000364023 107 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 RNU6-969P-201ENST00000383900 105 ntBASIC-0.01□□□□□ -2.41
HSPG2P98160 AC119751.3-201ENST00000399720 670 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms