Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MTCYBP33-201ENST00000575007 1130 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 HMGN1P30-201ENST00000589286 268 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 AL158032.1-201ENST00000605401 106 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.71□□□□□ -2.14
CCNA1P78396 AC099654.13-201ENST00000639774 207 ntBASIC1.71□□□□□ -2.14
CCNA1P78396 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CCNA1P78396 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CCNA1P78396 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCNA1P78396 AC073343.1-201ENST00000328239 651 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCNA1P78396 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CCNA1P78396 RNU6-1164P-201ENST00000364428 107 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 RNU5E-5P-201ENST00000365379 116 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.7□□□□□ -2.14
CCNA1P78396 MIR597-201ENST00000384968 97 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 MIR10A-201ENST00000385043 110 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 MIR1276-201ENST00000408707 83 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 ELOCP4-201ENST00000420090 333 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 PGBD4P6-201ENST00000421501 610 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 AL589872.1-201ENST00000426602 288 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 AL354695.1-201ENST00000427935 228 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.7□□□□□ -2.14
CCNA1P78396 USP9YP12-201ENST00000450481 570 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.7□□□□□ -2.14
CCNA1P78396 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.7□□□□□ -2.14
CCNA1P78396 RNU7-125P-201ENST00000458760 62 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.7□□□□□ -2.14
CCNA1P78396 AC005178.1-201ENST00000508392 440 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 RN7SKP287-201ENST00000516546 266 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.7□□□□□ -2.14
CCNA1P78396 MIR548AB-201ENST00000584917 84 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 DEFB131E-202ENST00000602581 683 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 AC112191.3-201ENST00000604371 277 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 AL022161.1-201ENST00000604390 213 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 AC093424.1-201ENST00000604999 338 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 AC138749.5-201ENST00000611461 208 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 AC116165.2-201ENST00000616705 206 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 AL353770.2-201ENST00000620024 78 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 AP000648.3-201ENST00000623539 4507 ntBASIC1.7□□□□□ -2.14
CCNA1P78396 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCNA1P78396 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CCNA1P78396 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
CCNA1P78396 Y_RNA.560-201ENST00000384689 102 ntBASIC1.69□□□□□ -2.14
CCNA1P78396 MRPL42P2-201ENST00000403169 426 ntBASIC1.69□□□□□ -2.14
CCNA1P78396 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.69□□□□□ -2.14
CCNA1P78396 RPS20P15-201ENST00000412792 311 ntBASIC1.69□□□□□ -2.14
CCNA1P78396 snoU109.2-201ENST00000459316 135 ntBASIC1.69□□□□□ -2.14
CCNA1P78396 AP001025.1-201ENST00000486139 332 ntBASIC1.69□□□□□ -2.14
CCNA1P78396 RNU6-759P-201ENST00000516740 103 ntBASIC1.69□□□□□ -2.14
CCNA1P78396 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.69□□□□□ -2.14
CCNA1P78396 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.69□□□□□ -2.14
CCNA1P78396 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.69□□□□□ -2.14
CCNA1P78396 MIR548AC-201ENST00000585049 88 ntBASIC1.69□□□□□ -2.14
CCNA1P78396 AC098848.2-201ENST00000588023 330 ntBASIC1.69□□□□□ -2.14
CCNA1P78396 AC010900.2-201ENST00000604508 210 ntBASIC1.69□□□□□ -2.14
CCNA1P78396 AC123912.5-201ENST00000605470 343 ntBASIC1.69□□□□□ -2.14
CCNA1P78396 RNU6-87P-201ENST00000607561 108 ntBASIC1.69□□□□□ -2.14
CCNA1P78396 MIR6504-201ENST00000613520 61 ntBASIC1.69□□□□□ -2.14
CCNA1P78396 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.69□□□□□ -2.14
CCNA1P78396 Y_RNA.122-201ENST00000363331 96 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 Y_RNA.224-201ENST00000364308 111 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 CISD1P1-201ENST00000393907 327 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 MIR1304-201ENST00000408243 91 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 RPS24P1-201ENST00000438550 371 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 UBE2D3P4-201ENST00000441973 436 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.68□□□□□ -2.14
CCNA1P78396 MTCO2P29-201ENST00000465212 189 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.68□□□□□ -2.14
CCNA1P78396 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.68□□□□□ -2.14
CCNA1P78396 RNU6-123P-201ENST00000516163 102 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 RNU6-1220P-201ENST00000517126 108 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 RNA5SP490-201ENST00000517141 136 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.68□□□□□ -2.14
CCNA1P78396 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CCNA1P78396 AP005435.4-201ENST00000529514 284 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.68□□□□□ -2.14
CCNA1P78396 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.68□□□□□ -2.14
CCNA1P78396 TRAV32-201ENST00000553993 340 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 AC008015.1-201ENST00000555505 465 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 AC090616.2-202ENST00000584248 222 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 MIR4760-201ENST00000585040 80 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 AC016925.2-201ENST00000605108 242 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 AC012409.4-201ENST00000612923 249 ntBASIC1.68□□□□□ -2.14
CCNA1P78396 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CCNA1P78396 SNORD14B-201ENST00000364533 90 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 RNU6-641P-201ENST00000384006 107 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 SNORA48.1-201ENST00000390879 135 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 AC114491.1-201ENST00000416095 246 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 AC074117.2-201ENST00000417130 397 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.67□□□□□ -2.14
CCNA1P78396 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.67□□□□□ -2.14
CCNA1P78396 AC137499.1-201ENST00000427602 88 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.67□□□□□ -2.14
CCNA1P78396 IFNA20P-201ENST00000436840 528 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.67□□□□□ -2.14
CCNA1P78396 CALM1P1-201ENST00000442082 433 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.67□□□□□ -2.14
CCNA1P78396 HMGN1P7-201ENST00000491722 313 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 MTCYBP40-201ENST00000509390 1135 ntBASIC1.67□□□□□ -2.14
CCNA1P78396 AC112206.3-201ENST00000514578 389 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms