Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.26□□□□□ -2.37
RPS28P62857 AC117454.1-201ENST00000491120 168 ntBASIC0.26□□□□□ -2.37
RPS28P62857 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.26□□□□□ -2.37
RPS28P62857 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.26□□□□□ -2.37
RPS28P62857 SNORA43.2-201ENST00000516652 128 ntBASIC0.26□□□□□ -2.37
RPS28P62857 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC0.26□□□□□ -2.37
RPS28P62857 AL136520.1-202ENST00000555494 763 ntBASIC0.26□□□□□ -2.37
RPS28P62857 YWHAZP1-201ENST00000556286 722 ntBASIC0.26□□□□□ -2.37
RPS28P62857 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.26□□□□□ -2.37
RPS28P62857 SNORA59B-202ENST00000578183 701 ntBASIC0.26□□□□□ -2.37
RPS28P62857 MIR4700-201ENST00000578311 74 ntBASIC0.26□□□□□ -2.37
RPS28P62857 AL353778.1-201ENST00000603149 408 ntBASIC0.26□□□□□ -2.37
RPS28P62857 AC099785.1-201ENST00000605697 437 ntBASIC0.26□□□□□ -2.37
RPS28P62857 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
RPS28P62857 SNORD3E-202ENST00000627253 216 ntBASIC0.26□□□□□ -2.37
RPS28P62857 MTND5P33-201ENST00000571250 1450 ntBASIC0.26□□□□□ -2.37
RPS28P62857 Y_RNA.126-201ENST00000363382 111 ntBASIC0.25□□□□□ -2.37
RPS28P62857 SNORD46.1-201ENST00000364139 104 ntBASIC0.25□□□□□ -2.37
RPS28P62857 RNU6-969P-201ENST00000383900 105 ntBASIC0.25□□□□□ -2.37
RPS28P62857 SNORA80D-201ENST00000384488 135 ntBASIC0.25□□□□□ -2.37
RPS28P62857 SNORA26.9-201ENST00000391322 122 ntBASIC0.25□□□□□ -2.37
RPS28P62857 AL031577.2-201ENST00000404133 280 ntBASIC0.25□□□□□ -2.37
RPS28P62857 SNORA3.2-201ENST00000408221 125 ntBASIC0.25□□□□□ -2.37
RPS28P62857 MTCO1P17-201ENST00000411522 491 ntBASIC0.25□□□□□ -2.37
RPS28P62857 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.25□□□□□ -2.37
RPS28P62857 SNORD13-201ENST00000459299 104 ntBASIC0.25□□□□□ -2.37
RPS28P62857 AC098869.1-201ENST00000481627 292 ntBASIC0.25□□□□□ -2.37
RPS28P62857 ATP5EP1-201ENST00000510257 156 ntBASIC0.25□□□□□ -2.37
RPS28P62857 RNU6-1041P-201ENST00000516254 102 ntBASIC0.25□□□□□ -2.37
RPS28P62857 APOOP3-201ENST00000536787 586 ntBASIC0.25□□□□□ -2.37
RPS28P62857 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC0.25□□□□□ -2.37
RPS28P62857 VN1R87P-201ENST00000596706 487 ntBASIC0.25□□□□□ -2.37
RPS28P62857 AL034555.1-201ENST00000604816 211 ntBASIC0.25□□□□□ -2.37
RPS28P62857 AL033523.1-201ENST00000605153 153 ntBASIC0.25□□□□□ -2.37
RPS28P62857 MIR6835-201ENST00000621552 64 ntBASIC0.25□□□□□ -2.37
RPS28P62857 AC024940.5-201ENST00000622889 474 ntBASIC0.25□□□□□ -2.37
RPS28P62857 AC011233.1-201ENST00000422812 283 ntBASIC0.24□□□□□ -2.37
RPS28P62857 RPS6P15-201ENST00000431996 751 ntBASIC0.24□□□□□ -2.37
RPS28P62857 GAPDHP17-201ENST00000449858 1001 ntBASIC0.24□□□□□ -2.37
RPS28P62857 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
RPS28P62857 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
RPS28P62857 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.24□□□□□ -2.37
RPS28P62857 AC115990.1-201ENST00000526957 301 ntBASIC0.24□□□□□ -2.37
RPS28P62857 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.24□□□□□ -2.37
RPS28P62857 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.24□□□□□ -2.37
RPS28P62857 MIR3136-201ENST00000583498 78 ntBASIC0.24□□□□□ -2.37
RPS28P62857 HMGN1P30-201ENST00000589286 268 ntBASIC0.24□□□□□ -2.37
RPS28P62857 AC018889.1-201ENST00000605372 397 ntBASIC0.24□□□□□ -2.37
RPS28P62857 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.24□□□□□ -2.37
RPS28P62857 AC009509.4-201ENST00000619202 509 ntBASIC0.24□□□□□ -2.37
RPS28P62857 AC092104.1-201ENST00000497346 1441 ntBASIC0.23□□□□□ -2.37
RPS28P62857 RNU6-777P-201ENST00000364265 104 ntBASIC0.23□□□□□ -2.37
RPS28P62857 RNU6-354P-201ENST00000383862 107 ntBASIC0.23□□□□□ -2.37
RPS28P62857 Y_RNA.408-201ENST00000383987 102 ntBASIC0.23□□□□□ -2.37
RPS28P62857 RNU6-610P-201ENST00000384264 107 ntBASIC0.23□□□□□ -2.37
RPS28P62857 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
RPS28P62857 AF228730.1-201ENST00000397972 663 ntBASIC0.23□□□□□ -2.37
RPS28P62857 RNU4-26P-201ENST00000410270 107 ntBASIC0.23□□□□□ -2.37
RPS28P62857 RNU6-1054P-201ENST00000411293 104 ntBASIC0.23□□□□□ -2.37
RPS28P62857 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.23□□□□□ -2.37
RPS28P62857 AL953862.1-201ENST00000423016 168 ntBASIC0.23□□□□□ -2.37
RPS28P62857 MTCO3P18-201ENST00000440206 761 ntBASIC0.23□□□□□ -2.37
RPS28P62857 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.23□□□□□ -2.37
RPS28P62857 AC105758.1-201ENST00000506038 399 ntBASIC0.23□□□□□ -2.37
RPS28P62857 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.23□□□□□ -2.37
RPS28P62857 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.23□□□□□ -2.37
RPS28P62857 MTCO3P7-201ENST00000510008 774 ntBASIC0.23□□□□□ -2.37
RPS28P62857 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
RPS28P62857 RNU6-922P-201ENST00000516753 99 ntBASIC0.23□□□□□ -2.37
RPS28P62857 AC087276.1-201ENST00000529659 480 ntBASIC0.23□□□□□ -2.37
RPS28P62857 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.23□□□□□ -2.37
RPS28P62857 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.23□□□□□ -2.37
RPS28P62857 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.23□□□□□ -2.37
RPS28P62857 MIR3912-201ENST00000577566 105 ntBASIC0.23□□□□□ -2.37
RPS28P62857 MIR4444-1-201ENST00000581696 74 ntBASIC0.23□□□□□ -2.37
RPS28P62857 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.23□□□□□ -2.37
RPS28P62857 MIR4444-2-201ENST00000584390 74 ntBASIC0.23□□□□□ -2.37
RPS28P62857 MIR4443-201ENST00000585052 53 ntBASIC0.23□□□□□ -2.37
RPS28P62857 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.23□□□□□ -2.37
RPS28P62857 MIR15A-201ENST00000607334 83 ntBASIC0.23□□□□□ -2.37
RPS28P62857 AC023158.2-201ENST00000614876 543 ntBASIC0.23□□□□□ -2.37
RPS28P62857 AC010149.2-201ENST00000637608 315 ntBASIC0.23□□□□□ -2.37
RPS28P62857 ELL2P3-201ENST00000457883 1602 ntBASIC0.23□□□□□ -2.37
RPS28P62857 RNU4-82P-201ENST00000362443 140 ntBASIC0.22□□□□□ -2.37
RPS28P62857 MIR491-201ENST00000384877 84 ntBASIC0.22□□□□□ -2.37
RPS28P62857 AC092809.3-201ENST00000415453 231 ntBASIC0.22□□□□□ -2.37
RPS28P62857 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.22□□□□□ -2.37
RPS28P62857 AC092991.1-201ENST00000477176 376 ntBASIC0.22□□□□□ -2.37
RPS28P62857 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC0.22□□□□□ -2.37
RPS28P62857 MIR4698-201ENST00000577795 80 ntBASIC0.22□□□□□ -2.37
RPS28P62857 MIR4429-201ENST00000580105 73 ntBASIC0.22□□□□□ -2.37
RPS28P62857 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.22□□□□□ -2.37
RPS28P62857 AL138889.2-201ENST00000603883 242 ntBASIC0.22□□□□□ -2.37
RPS28P62857 AC012557.2-201ENST00000605919 418 ntBASIC0.22□□□□□ -2.37
RPS28P62857 AC108706.1-201ENST00000611053 297 ntBASIC0.22□□□□□ -2.37
RPS28P62857 AC097460.3-201ENST00000623099 442 ntBASIC0.22□□□□□ -2.37
RPS28P62857 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.22□□□□□ -2.37
RPS28P62857 RNU4-15P-201ENST00000362613 141 ntBASIC0.21□□□□□ -2.38
RPS28P62857 RNU6-468P-201ENST00000384003 109 ntBASIC0.21□□□□□ -2.38
RPS28P62857 RNU6-207P-201ENST00000384137 107 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms