Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 SNORA31.16-201ENST00000516773 139 ntBASIC0.78□□□□□ -2.28
LSM6P62312 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.78□□□□□ -2.28
LSM6P62312 AP001004.1-201ENST00000582468 324 ntBASIC0.78□□□□□ -2.28
LSM6P62312 VN1R82P-201ENST00000601481 356 ntBASIC0.78□□□□□ -2.28
LSM6P62312 KC877982.1-201ENST00000602313 470 ntBASIC0.78□□□□□ -2.28
LSM6P62312 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
LSM6P62312 MIR15A-201ENST00000607334 83 ntBASIC0.78□□□□□ -2.28
LSM6P62312 RNU6-87P-201ENST00000607561 108 ntBASIC0.78□□□□□ -2.28
LSM6P62312 AC024940.5-201ENST00000622889 474 ntBASIC0.78□□□□□ -2.28
LSM6P62312 SMIM11P1-201ENST00000369586 178 ntBASIC0.77□□□□□ -2.29
LSM6P62312 SNORA75B-201ENST00000384053 137 ntBASIC0.77□□□□□ -2.29
LSM6P62312 MIR10A-201ENST00000385043 110 ntBASIC0.77□□□□□ -2.29
LSM6P62312 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
LSM6P62312 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
LSM6P62312 RNU6-321P-201ENST00000410912 106 ntBASIC0.77□□□□□ -2.29
LSM6P62312 TIMM9P1-201ENST00000436122 256 ntBASIC0.77□□□□□ -2.29
LSM6P62312 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.77□□□□□ -2.29
LSM6P62312 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.77□□□□□ -2.29
LSM6P62312 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.77□□□□□ -2.29
LSM6P62312 HMGN1P7-201ENST00000491722 313 ntBASIC0.77□□□□□ -2.29
LSM6P62312 AC005840.1-201ENST00000498412 377 ntBASIC0.77□□□□□ -2.29
LSM6P62312 AC008837.2-201ENST00000513076 418 ntBASIC0.77□□□□□ -2.29
LSM6P62312 SNORA43.2-201ENST00000516652 128 ntBASIC0.77□□□□□ -2.29
LSM6P62312 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.77□□□□□ -2.29
LSM6P62312 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.77□□□□□ -2.29
LSM6P62312 AC115990.1-201ENST00000526957 301 ntBASIC0.77□□□□□ -2.29
LSM6P62312 AC211469.2-201ENST00000605461 205 ntBASIC0.77□□□□□ -2.29
LSM6P62312 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
LSM6P62312 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.77□□□□□ -2.29
LSM6P62312 AC092104.1-201ENST00000497346 1441 ntBASIC0.77□□□□□ -2.29
LSM6P62312 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
LSM6P62312 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
LSM6P62312 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.76□□□□□ -2.29
LSM6P62312 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.76□□□□□ -2.29
LSM6P62312 RNU6-1019P-201ENST00000364424 107 ntBASIC0.76□□□□□ -2.29
LSM6P62312 MIR222-201ENST00000384992 110 ntBASIC0.76□□□□□ -2.29
LSM6P62312 RNU2-64P-201ENST00000411315 191 ntBASIC0.76□□□□□ -2.29
LSM6P62312 VPS26BP1-201ENST00000417155 755 ntBASIC0.76□□□□□ -2.29
LSM6P62312 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.76□□□□□ -2.29
LSM6P62312 AC244505.5-201ENST00000443639 207 ntBASIC0.76□□□□□ -2.29
LSM6P62312 TOMM22P6-201ENST00000465035 409 ntBASIC0.76□□□□□ -2.29
LSM6P62312 ARL2BPP4-201ENST00000506854 471 ntBASIC0.76□□□□□ -2.29
LSM6P62312 AC109445.1-201ENST00000512356 383 ntBASIC0.76□□□□□ -2.29
LSM6P62312 SCARNA16.2-201ENST00000516520 172 ntBASIC0.76□□□□□ -2.29
LSM6P62312 RNA5SP437-201ENST00000517249 129 ntBASIC0.76□□□□□ -2.29
LSM6P62312 AC091163.3-201ENST00000518269 1144 ntBASIC0.76□□□□□ -2.29
LSM6P62312 AC009712.1-201ENST00000564938 316 ntBASIC0.76□□□□□ -2.29
LSM6P62312 MIR4653-201ENST00000585107 83 ntBASIC0.76□□□□□ -2.29
LSM6P62312 MTATP6P2-201ENST00000603319 678 ntBASIC0.76□□□□□ -2.29
LSM6P62312 AL596327.1-201ENST00000603629 213 ntBASIC0.76□□□□□ -2.29
LSM6P62312 AL020996.3-201ENST00000606617 222 ntBASIC0.76□□□□□ -2.29
LSM6P62312 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.76□□□□□ -2.29
LSM6P62312 AL355816.2-201ENST00000610049 647 ntBASIC0.76□□□□□ -2.29
LSM6P62312 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.76□□□□□ -2.29
LSM6P62312 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.75□□□□□ -2.29
LSM6P62312 RNY1P10-201ENST00000363268 113 ntBASIC0.75□□□□□ -2.29
LSM6P62312 SNORD32B-201ENST00000364460 84 ntBASIC0.75□□□□□ -2.29
LSM6P62312 MIR548B-201ENST00000385247 97 ntBASIC0.75□□□□□ -2.29
LSM6P62312 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.75□□□□□ -2.29
LSM6P62312 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.75□□□□□ -2.29
LSM6P62312 AC119751.4-201ENST00000507498 357 ntBASIC0.75□□□□□ -2.29
LSM6P62312 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
LSM6P62312 RNA5SP503-201ENST00000517047 117 ntBASIC0.75□□□□□ -2.29
LSM6P62312 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.75□□□□□ -2.29
LSM6P62312 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.75□□□□□ -2.29
LSM6P62312 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.75□□□□□ -2.29
LSM6P62312 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.75□□□□□ -2.29
LSM6P62312 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.75□□□□□ -2.29
LSM6P62312 AL590229.1-201ENST00000603497 542 ntBASIC0.75□□□□□ -2.29
LSM6P62312 AL354696.1-201ENST00000614652 497 ntBASIC0.75□□□□□ -2.29
LSM6P62312 OR4G3P-201ENST00000633500 913 ntBASIC0.75□□□□□ -2.29
LSM6P62312 AC091948.2-201ENST00000636510 279 ntBASIC0.75□□□□□ -2.29
LSM6P62312 SNORD56.1-201ENST00000362913 68 ntBASIC0.74□□□□□ -2.29
LSM6P62312 SNORD114-2-201ENST00000363953 78 ntBASIC0.74□□□□□ -2.29
LSM6P62312 RNU6-1176P-201ENST00000390955 107 ntBASIC0.74□□□□□ -2.29
LSM6P62312 RPS3AP36-201ENST00000398190 775 ntBASIC0.74□□□□□ -2.29
LSM6P62312 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.74□□□□□ -2.29
LSM6P62312 RN7SKP61-201ENST00000410642 295 ntBASIC0.74□□□□□ -2.29
LSM6P62312 PIGFP2-201ENST00000421400 651 ntBASIC0.74□□□□□ -2.29
LSM6P62312 Z73417.1-201ENST00000447373 778 ntBASIC0.74□□□□□ -2.29
LSM6P62312 MTCO3P27-201ENST00000514397 196 ntBASIC0.74□□□□□ -2.29
LSM6P62312 RNU5F-2P-201ENST00000516066 82 ntBASIC0.74□□□□□ -2.29
LSM6P62312 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
LSM6P62312 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.74□□□□□ -2.29
LSM6P62312 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.74□□□□□ -2.29
LSM6P62312 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.74□□□□□ -2.29
LSM6P62312 AC005776.1-201ENST00000603164 290 ntBASIC0.74□□□□□ -2.29
LSM6P62312 FAM71BP1-201ENST00000604431 523 ntBASIC0.74□□□□□ -2.29
LSM6P62312 AC018889.1-201ENST00000605372 397 ntBASIC0.74□□□□□ -2.29
LSM6P62312 AC016727.1-205ENST00000605437 569 ntBASIC0.74□□□□□ -2.29
LSM6P62312 RNU6-88P-201ENST00000606801 100 ntBASIC0.74□□□□□ -2.29
LSM6P62312 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
LSM6P62312 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
LSM6P62312 SNORA63D-201ENST00000364359 132 ntBASIC0.73□□□□□ -2.29
LSM6P62312 RNU11-5P-201ENST00000391216 129 ntBASIC0.73□□□□□ -2.29
LSM6P62312 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.73□□□□□ -2.29
LSM6P62312 MTCO3P41-201ENST00000414801 328 ntBASIC0.73□□□□□ -2.29
LSM6P62312 MTCO3P29-201ENST00000432119 779 ntBASIC0.73□□□□□ -2.29
LSM6P62312 TRBVA-201ENST00000498804 316 ntBASIC0.73□□□□□ -2.29
LSM6P62312 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms