Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 7SK.7-201ENST00000603504 247 ntBASIC3.03□□□□□ -1.92
SUMO3P55854 AL359198.2-201ENST00000611836 194 ntBASIC3.03□□□□□ -1.92
SUMO3P55854 MIR5701-2-201ENST00000615634 82 ntBASIC3.03□□□□□ -1.92
SUMO3P55854 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.03□□□□□ -1.92
SUMO3P55854 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SUMO3P55854 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
SUMO3P55854 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.03□□□□□ -1.92
SUMO3P55854 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SUMO3P55854 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SUMO3P55854 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SUMO3P55854 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.02□□□□□ -1.93
SUMO3P55854 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.02□□□□□ -1.93
SUMO3P55854 RNU6-1115P-201ENST00000362490 106 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 Y_RNA.40-201ENST00000362645 93 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 U3.13-201ENST00000364804 214 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 RNU4-9P-201ENST00000364951 139 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 XGY1-201ENST00000381172 446 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 AP002088.1-201ENST00000382740 395 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 Y_RNA.463-201ENST00000384271 102 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 MIR183-201ENST00000384958 110 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.02□□□□□ -1.93
SUMO3P55854 AL353705.4-201ENST00000449661 238 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 MIR2053-201ENST00000459295 91 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.02□□□□□ -1.93
SUMO3P55854 RPL30P10-201ENST00000488148 337 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 AC110794.1-201ENST00000505816 425 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 RNU5F-2P-201ENST00000516066 82 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.02□□□□□ -1.93
SUMO3P55854 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.02□□□□□ -1.93
SUMO3P55854 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.02□□□□□ -1.93
SUMO3P55854 SNRPGP18-201ENST00000553000 214 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 MIR4444-1-201ENST00000581696 74 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 MIR4444-2-201ENST00000584390 74 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SUMO3P55854 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 uc_338.1-201ENST00000612113 180 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.02□□□□□ -1.93
SUMO3P55854 AC073476.4-201ENST00000628409 72 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 MIR7157-201ENST00000635801 60 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 AL450472.1-202ENST00000637286 180 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 U6.105-201ENST00000637379 88 ntBASIC3.02□□□□□ -1.93
SUMO3P55854 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SUMO3P55854 AL353743.1-202ENST00000431724 1695 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.01□□□□□ -1.93
SUMO3P55854 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SUMO3P55854 RNU6-655P-201ENST00000362858 107 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 RNU5B-2P-201ENST00000363036 113 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 Y_RNA.112-201ENST00000363250 102 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 Y_RNA.138-201ENST00000363462 102 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 RNU6-1210P-201ENST00000363775 107 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 MTCYBP2-201ENST00000407745 171 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 RN7SKP27-201ENST00000410684 333 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 RNU6-1328P-201ENST00000410938 106 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.01□□□□□ -1.93
SUMO3P55854 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.01□□□□□ -1.93
SUMO3P55854 EIF4EP4-201ENST00000424916 578 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SUMO3P55854 MTCYBP6-201ENST00000441810 138 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 AL137792.2-201ENST00000443484 235 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 HMGN1P18-201ENST00000457642 277 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.01□□□□□ -1.93
SUMO3P55854 AC096576.1-201ENST00000489014 359 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 RPL23AP75-201ENST00000491601 451 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.01□□□□□ -1.93
SUMO3P55854 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.01□□□□□ -1.93
SUMO3P55854 AL590705.4-201ENST00000532209 134 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 RPL23AP88-201ENST00000605759 454 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 uc_338.22-201ENST00000622722 187 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 SCARNA4-201ENST00000629045 128 ntBASIC3.01□□□□□ -1.93
SUMO3P55854 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.01□□□□□ -1.93
SUMO3P55854 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.01□□□□□ -1.93
SUMO3P55854 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SUMO3P55854 5S_rRNA.1-201ENST00000364415 116 ntBASIC3□□□□□ -1.93
SUMO3P55854 RNU6-474P-201ENST00000384243 107 ntBASIC3□□□□□ -1.93
SUMO3P55854 Y_RNA.577-201ENST00000384794 101 ntBASIC3□□□□□ -1.93
SUMO3P55854 MIR490-201ENST00000384865 128 ntBASIC3□□□□□ -1.93
SUMO3P55854 U3.19-201ENST00000390893 196 ntBASIC3□□□□□ -1.93
SUMO3P55854 SNORA48.7-201ENST00000391302 135 ntBASIC3□□□□□ -1.93
SUMO3P55854 CBX3P9-201ENST00000402326 552 ntBASIC3□□□□□ -1.93
SUMO3P55854 AL590135.1-201ENST00000422215 156 ntBASIC3□□□□□ -1.93
SUMO3P55854 AL358453.1-201ENST00000422522 250 ntBASIC3□□□□□ -1.93
SUMO3P55854 AC019205.3-201ENST00000424573 156 ntBASIC3□□□□□ -1.93
SUMO3P55854 MTCYBP10-201ENST00000424905 650 ntBASIC3□□□□□ -1.93
SUMO3P55854 AL353997.1-201ENST00000432936 108 ntBASIC3□□□□□ -1.93
SUMO3P55854 BX679664.1-201ENST00000434429 253 ntBASIC3□□□□□ -1.93
SUMO3P55854 CST9LP2-201ENST00000437612 320 ntBASIC3□□□□□ -1.93
SUMO3P55854 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3□□□□□ -1.93
SUMO3P55854 AC016700.2-201ENST00000446011 156 ntBASIC3□□□□□ -1.93
SUMO3P55854 Y_RNA.631-201ENST00000459607 101 ntBASIC3□□□□□ -1.93
SUMO3P55854 RPL21P10-201ENST00000463521 490 ntBASIC3□□□□□ -1.93
SUMO3P55854 AC008155.2-201ENST00000464337 397 ntBASIC3□□□□□ -1.93
SUMO3P55854 AL121594.1-201ENST00000475906 575 ntBASIC3□□□□□ -1.93
SUMO3P55854 AC090525.1-201ENST00000479116 478 ntBASIC3□□□□□ -1.93
SUMO3P55854 AC015911.1-201ENST00000495111 156 ntBASIC3□□□□□ -1.93
SUMO3P55854 HMGB1P35-201ENST00000503360 598 ntBASIC3□□□□□ -1.93
SUMO3P55854 RNU7-175P-201ENST00000515915 61 ntBASIC3□□□□□ -1.93
SUMO3P55854 RNU6-120P-201ENST00000516077 103 ntBASIC3□□□□□ -1.93
SUMO3P55854 RNU2-53P-201ENST00000516257 147 ntBASIC3□□□□□ -1.93
SUMO3P55854 RNU6-567P-201ENST00000516746 107 ntBASIC3□□□□□ -1.93
SUMO3P55854 SCARNA3-201ENST00000517097 143 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms