Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 COPS8P3-201ENST00000526024 482 ntBASIC2.45□□□□□ -2.02
PDX1P52945 HSPE1P20-201ENST00000538133 289 ntBASIC2.45□□□□□ -2.02
PDX1P52945 SCOCP1-201ENST00000554676 349 ntBASIC2.45□□□□□ -2.02
PDX1P52945 PSMA3P-201ENST00000555485 635 ntBASIC2.45□□□□□ -2.02
PDX1P52945 RPL23AP78-201ENST00000599928 470 ntBASIC2.45□□□□□ -2.02
PDX1P52945 RBM11P1-201ENST00000604951 799 ntBASIC2.45□□□□□ -2.02
PDX1P52945 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
PDX1P52945 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
PDX1P52945 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.45□□□□□ -2.02
PDX1P52945 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PDX1P52945 AL109809.4-201ENST00000603520 2185 ntBASIC2.44□□□□□ -2.02
PDX1P52945 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PDX1P52945 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PDX1P52945 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
PDX1P52945 Y_RNA.160-201ENST00000363677 92 ntBASIC2.44□□□□□ -2.02
PDX1P52945 SNORD113-7-201ENST00000363762 77 ntBASIC2.44□□□□□ -2.02
PDX1P52945 RNU6-461P-201ENST00000364195 107 ntBASIC2.44□□□□□ -2.02
PDX1P52945 SET-203ENST00000372688 801 ntTSL 2 BASIC2.44□□□□□ -2.02
PDX1P52945 RNU6-622P-201ENST00000384272 103 ntBASIC2.44□□□□□ -2.02
PDX1P52945 MT-TL1-201ENST00000386347 75 ntBASIC2.44□□□□□ -2.02
PDX1P52945 RNU6-876P-201ENST00000391295 104 ntBASIC2.44□□□□□ -2.02
PDX1P52945 FGF7P8-201ENST00000402994 292 ntBASIC2.44□□□□□ -2.02
PDX1P52945 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.44□□□□□ -2.02
PDX1P52945 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.44□□□□□ -2.02
PDX1P52945 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.44□□□□□ -2.02
PDX1P52945 AL513477.1-202ENST00000417061 214 ntBASIC2.44□□□□□ -2.02
PDX1P52945 AC074117.2-201ENST00000417130 397 ntBASIC2.44□□□□□ -2.02
PDX1P52945 AC009161.1-201ENST00000417306 376 ntBASIC2.44□□□□□ -2.02
PDX1P52945 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PDX1P52945 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.44□□□□□ -2.02
PDX1P52945 AL365400.1-201ENST00000431854 640 ntBASIC2.44□□□□□ -2.02
PDX1P52945 AC011816.1-201ENST00000441346 546 ntBASIC2.44□□□□□ -2.02
PDX1P52945 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PDX1P52945 RPL23AP70-201ENST00000483361 460 ntBASIC2.44□□□□□ -2.02
PDX1P52945 RPL23AP49-201ENST00000492925 468 ntBASIC2.44□□□□□ -2.02
PDX1P52945 RPS29P21-201ENST00000496272 170 ntBASIC2.44□□□□□ -2.02
PDX1P52945 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.44□□□□□ -2.02
PDX1P52945 RNU6-273P-201ENST00000516937 96 ntBASIC2.44□□□□□ -2.02
PDX1P52945 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.44□□□□□ -2.02
PDX1P52945 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.44□□□□□ -2.02
PDX1P52945 RPS15AP11-201ENST00000594193 385 ntBASIC2.44□□□□□ -2.02
PDX1P52945 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.44□□□□□ -2.02
PDX1P52945 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
PDX1P52945 AC009248.2-201ENST00000619826 254 ntBASIC2.44□□□□□ -2.02
PDX1P52945 U4.3-201ENST00000621047 82 ntBASIC2.44□□□□□ -2.02
PDX1P52945 MIR3529-201ENST00000637713 78 ntBASIC2.44□□□□□ -2.02
PDX1P52945 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.44□□□□□ -2.02
PDX1P52945 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.43□□□□□ -2.02
PDX1P52945 MIR592-201ENST00000384959 97 ntBASIC2.43□□□□□ -2.02
PDX1P52945 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PDX1P52945 RNU4-53P-201ENST00000410828 140 ntBASIC2.43□□□□□ -2.02
PDX1P52945 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.43□□□□□ -2.02
PDX1P52945 VN1R36P-201ENST00000414936 291 ntBASIC2.43□□□□□ -2.02
PDX1P52945 Z98742.3-201ENST00000418637 326 ntBASIC2.43□□□□□ -2.02
PDX1P52945 AL590632.1-201ENST00000424289 371 ntBASIC2.43□□□□□ -2.02
PDX1P52945 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.43□□□□□ -2.02
PDX1P52945 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.43□□□□□ -2.02
PDX1P52945 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PDX1P52945 AC007969.2-201ENST00000441891 191 ntBASIC2.43□□□□□ -2.02
PDX1P52945 AC006026.2-201ENST00000457376 180 ntBASIC2.43□□□□□ -2.02
PDX1P52945 snoU13.26-201ENST00000459452 105 ntBASIC2.43□□□□□ -2.02
PDX1P52945 AC112771.1-201ENST00000463581 102 ntBASIC2.43□□□□□ -2.02
PDX1P52945 RPL31P58-201ENST00000469001 379 ntBASIC2.43□□□□□ -2.02
PDX1P52945 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.43□□□□□ -2.02
PDX1P52945 AC098799.2-201ENST00000509466 868 ntBASIC2.43□□□□□ -2.02
PDX1P52945 AC092436.3-201ENST00000511788 257 ntBASIC2.43□□□□□ -2.02
PDX1P52945 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.43□□□□□ -2.02
PDX1P52945 RNU6-377P-201ENST00000515965 102 ntBASIC2.43□□□□□ -2.02
PDX1P52945 RNU4-49P-201ENST00000516080 140 ntBASIC2.43□□□□□ -2.02
PDX1P52945 RNU5B-3P-201ENST00000516601 115 ntBASIC2.43□□□□□ -2.02
PDX1P52945 RNU6-256P-201ENST00000516747 97 ntBASIC2.43□□□□□ -2.02
PDX1P52945 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.43□□□□□ -2.02
PDX1P52945 AC090897.2-201ENST00000581715 130 ntBASIC2.43□□□□□ -2.02
PDX1P52945 MIR3672-201ENST00000584290 82 ntBASIC2.43□□□□□ -2.02
PDX1P52945 AC009314.1-201ENST00000603871 304 ntBASIC2.43□□□□□ -2.02
PDX1P52945 uc_338.14-201ENST00000613162 166 ntBASIC2.43□□□□□ -2.02
PDX1P52945 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.43□□□□□ -2.02
PDX1P52945 DUXAP9-208ENST00000622815 614 ntBASIC2.43□□□□□ -2.02
PDX1P52945 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PDX1P52945 AC009033.1-201ENST00000624279 431 ntBASIC2.43□□□□□ -2.02
PDX1P52945 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.42□□□□□ -2.02
PDX1P52945 AC080128.1-201ENST00000474389 1917 ntBASIC2.42□□□□□ -2.02
PDX1P52945 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
PDX1P52945 AC138915.1-201ENST00000565427 1685 ntBASIC2.42□□□□□ -2.02
PDX1P52945 AL359854.1-201ENST00000614203 1594 ntBASIC2.42□□□□□ -2.02
PDX1P52945 OR56A5-201ENST00000340110 738 ntBASIC2.42□□□□□ -2.02
PDX1P52945 Y_RNA.135-201ENST00000363439 95 ntBASIC2.42□□□□□ -2.02
PDX1P52945 SNORA25.6-201ENST00000364121 118 ntBASIC2.42□□□□□ -2.02
PDX1P52945 Y_RNA.279-201ENST00000364763 95 ntBASIC2.42□□□□□ -2.02
PDX1P52945 Y_RNA.303-201ENST00000364998 94 ntBASIC2.42□□□□□ -2.02
PDX1P52945 RNU6-1329P-201ENST00000365664 107 ntBASIC2.42□□□□□ -2.02
PDX1P52945 RN7SKP192-201ENST00000411291 327 ntBASIC2.42□□□□□ -2.02
PDX1P52945 HMGN2P35-201ENST00000412164 270 ntBASIC2.42□□□□□ -2.02
PDX1P52945 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.42□□□□□ -2.02
PDX1P52945 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.42□□□□□ -2.02
PDX1P52945 FABP5P14-201ENST00000437273 393 ntBASIC2.42□□□□□ -2.02
PDX1P52945 UBBP3-201ENST00000445497 241 ntBASIC2.42□□□□□ -2.02
PDX1P52945 Z96811.1-201ENST00000445880 108 ntBASIC2.42□□□□□ -2.02
PDX1P52945 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.42□□□□□ -2.02
PDX1P52945 PRDX4P1-201ENST00000507189 574 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms