Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNU4-12P-201ENST00000365233 139 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 SNORA4.3-201ENST00000365564 137 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 RNA5SP390-201ENST00000410191 113 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.43□□□□□ -2.34
GTF2A1P52655 AC083875.1-201ENST00000419509 405 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.43□□□□□ -2.34
GTF2A1P52655 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.43□□□□□ -2.34
GTF2A1P52655 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.43□□□□□ -2.34
GTF2A1P52655 FTH1P25-201ENST00000447665 469 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.43□□□□□ -2.34
GTF2A1P52655 COX6CP6-201ENST00000490840 228 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 RNA5SP384-201ENST00000516615 116 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 SUMO2P18-201ENST00000518873 252 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 MTND1P36-201ENST00000522384 936 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 DEFB131D-201ENST00000526803 184 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.43□□□□□ -2.34
GTF2A1P52655 AC109446.2-201ENST00000567872 497 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.43□□□□□ -2.34
GTF2A1P52655 AC022432.1-201ENST00000595739 310 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 AC098483.2-201ENST00000603158 454 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 AC069545.1-201ENST00000605671 358 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 AC104465.1-201ENST00000611365 139 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 AC005858.4-201ENST00000623191 700 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 Y_RNA.124-201ENST00000363339 93 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 RNU6-289P-201ENST00000364093 107 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 RNU6-853P-201ENST00000364306 107 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 RNU6-17P-201ENST00000384245 107 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 RNU6-72P-201ENST00000384285 79 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 RNU6-18P-201ENST00000384527 107 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 RAP1BP3-201ENST00000407180 549 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 FCF1P10-201ENST00000407590 479 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.42□□□□□ -2.34
GTF2A1P52655 AC123900.1-201ENST00000420390 96 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.42□□□□□ -2.34
GTF2A1P52655 AC063976.4-201ENST00000421971 163 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 FO393414.1-201ENST00000428697 1184 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 GTF2IP13-201ENST00000438487 386 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.42□□□□□ -2.34
GTF2A1P52655 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
GTF2A1P52655 AC108078.2-201ENST00000510750 236 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 SNORD60.2-201ENST00000516883 86 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.42□□□□□ -2.34
GTF2A1P52655 AL157871.3-201ENST00000557231 293 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.42□□□□□ -2.34
GTF2A1P52655 AC068790.6-201ENST00000602558 258 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 AC090186.1-201ENST00000605991 572 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 AL451064.1-201ENST00000607718 471 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.42□□□□□ -2.34
GTF2A1P52655 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.42□□□□□ -2.34
GTF2A1P52655 Y_RNA.33-201ENST00000362591 102 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 SNORD32B-201ENST00000364460 84 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 RNU1-93P-201ENST00000364704 169 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 RNU6-354P-201ENST00000383862 107 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 RNU6-207P-201ENST00000384137 107 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 RNU6-610P-201ENST00000384264 107 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 SNORD116-20-201ENST00000384529 92 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 RNU6-1176P-201ENST00000390955 107 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 AL031577.2-201ENST00000404133 280 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.41□□□□□ -2.34
GTF2A1P52655 AL365338.1-201ENST00000422282 858 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 AC013262.1-201ENST00000426710 252 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.41□□□□□ -2.34
GTF2A1P52655 LARP1BP3-201ENST00000437229 869 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 AL583843.1-201ENST00000456070 346 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 MTND2P30-201ENST00000456663 382 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 MIR449C-201ENST00000516047 92 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 RN7SKP49-201ENST00000516675 260 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 RNA5SP102-201ENST00000516865 106 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.41□□□□□ -2.34
GTF2A1P52655 HSPE1P4-201ENST00000550617 308 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.41□□□□□ -2.34
GTF2A1P52655 CYP3A137P-201ENST00000562436 69 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 RPL21P136-201ENST00000605378 396 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.41□□□□□ -2.34
GTF2A1P52655 PCMTD1P7-201ENST00000634506 357 ntBASIC0.41□□□□□ -2.34
GTF2A1P52655 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.41□□□□□ -2.34
GTF2A1P52655 RNY1P10-201ENST00000363268 113 ntBASIC0.4□□□□□ -2.35
GTF2A1P52655 RNA5SP259-201ENST00000365541 109 ntBASIC0.4□□□□□ -2.35
GTF2A1P52655 RNU6-110P-201ENST00000384508 104 ntBASIC0.4□□□□□ -2.35
GTF2A1P52655 RNU6-910P-201ENST00000390844 107 ntBASIC0.4□□□□□ -2.35
GTF2A1P52655 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.4□□□□□ -2.35
GTF2A1P52655 AP000275.1-201ENST00000411943 390 ntBASIC0.4□□□□□ -2.35
GTF2A1P52655 MTCYBP5-201ENST00000423752 1135 ntBASIC0.4□□□□□ -2.35
GTF2A1P52655 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.4□□□□□ -2.35
GTF2A1P52655 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.4□□□□□ -2.35
GTF2A1P52655 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
GTF2A1P52655 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.4□□□□□ -2.35
GTF2A1P52655 AC079140.3-201ENST00000511111 550 ntBASIC0.4□□□□□ -2.35
GTF2A1P52655 RNU6-914P-201ENST00000516749 109 ntBASIC0.4□□□□□ -2.35
GTF2A1P52655 AC104417.1-201ENST00000523974 751 ntBASIC0.4□□□□□ -2.35
GTF2A1P52655 AC087897.1-201ENST00000550134 156 ntBASIC0.4□□□□□ -2.35
GTF2A1P52655 MIR1273C-201ENST00000578669 77 ntBASIC0.4□□□□□ -2.35
GTF2A1P52655 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.4□□□□□ -2.35
GTF2A1P52655 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.4□□□□□ -2.35
GTF2A1P52655 VN1R82P-201ENST00000601481 356 ntBASIC0.4□□□□□ -2.35
GTF2A1P52655 AL355816.2-201ENST00000610049 647 ntBASIC0.4□□□□□ -2.35
GTF2A1P52655 MTND5P42-201ENST00000637720 498 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms