Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNU6-325P-201ENST00000411132 105 ntBASIC3.07□□□□□ -1.92
NEK3P51956 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.07□□□□□ -1.92
NEK3P51956 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.07□□□□□ -1.92
NEK3P51956 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.07□□□□□ -1.92
NEK3P51956 AC244670.1-201ENST00000436879 112 ntBASIC3.07□□□□□ -1.92
NEK3P51956 DAP3P1-201ENST00000441522 278 ntBASIC3.07□□□□□ -1.92
NEK3P51956 RPL21P39-201ENST00000463605 483 ntBASIC3.07□□□□□ -1.92
NEK3P51956 AC087190.1-201ENST00000484462 480 ntBASIC3.07□□□□□ -1.92
NEK3P51956 AC093591.1-201ENST00000491435 481 ntBASIC3.07□□□□□ -1.92
NEK3P51956 RPL21P16-201ENST00000495531 483 ntBASIC3.07□□□□□ -1.92
NEK3P51956 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.07□□□□□ -1.92
NEK3P51956 RNU6-566P-201ENST00000516790 107 ntBASIC3.07□□□□□ -1.92
NEK3P51956 AP005902.1-201ENST00000521358 186 ntBASIC3.07□□□□□ -1.92
NEK3P51956 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.07□□□□□ -1.92
NEK3P51956 AC138761.3-201ENST00000579993 334 ntBASIC3.07□□□□□ -1.92
NEK3P51956 MIR4742-201ENST00000581069 85 ntBASIC3.07□□□□□ -1.92
NEK3P51956 AC078899.3-201ENST00000599065 212 ntBASIC3.07□□□□□ -1.92
NEK3P51956 AL627309.6-201ENST00000606857 840 ntBASIC3.07□□□□□ -1.92
NEK3P51956 MIR8076-201ENST00000611401 83 ntBASIC3.07□□□□□ -1.92
NEK3P51956 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.07□□□□□ -1.92
NEK3P51956 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.07□□□□□ -1.92
NEK3P51956 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NEK3P51956 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.06□□□□□ -1.92
NEK3P51956 AC073325.2-201ENST00000339545 159 ntBASIC3.06□□□□□ -1.92
NEK3P51956 Y_RNA.40-201ENST00000362645 93 ntBASIC3.06□□□□□ -1.92
NEK3P51956 RNU6-1317P-201ENST00000364582 104 ntBASIC3.06□□□□□ -1.92
NEK3P51956 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.06□□□□□ -1.92
NEK3P51956 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.06□□□□□ -1.92
NEK3P51956 SNORA26.3-201ENST00000391119 136 ntBASIC3.06□□□□□ -1.92
NEK3P51956 RNA5SP274-201ENST00000410484 108 ntBASIC3.06□□□□□ -1.92
NEK3P51956 NCOR1P3-201ENST00000420479 303 ntBASIC3.06□□□□□ -1.92
NEK3P51956 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.06□□□□□ -1.92
NEK3P51956 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.06□□□□□ -1.92
NEK3P51956 AL031659.1-201ENST00000447075 539 ntBASIC3.06□□□□□ -1.92
NEK3P51956 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.06□□□□□ -1.92
NEK3P51956 RN7SL633P-201ENST00000488974 297 ntBASIC3.06□□□□□ -1.92
NEK3P51956 AC140059.1-201ENST00000489238 361 ntBASIC3.06□□□□□ -1.92
NEK3P51956 AC116353.2-201ENST00000505332 712 ntBASIC3.06□□□□□ -1.92
NEK3P51956 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.06□□□□□ -1.92
NEK3P51956 SNORA20.3-201ENST00000516880 132 ntBASIC3.06□□□□□ -1.92
NEK3P51956 RNA5SP454-201ENST00000517231 127 ntBASIC3.06□□□□□ -1.92
NEK3P51956 HSPE1P4-201ENST00000550617 308 ntBASIC3.06□□□□□ -1.92
NEK3P51956 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.06□□□□□ -1.92
NEK3P51956 AL713866.2-201ENST00000603579 219 ntBASIC3.06□□□□□ -1.92
NEK3P51956 AL670379.2-201ENST00000604983 252 ntBASIC3.06□□□□□ -1.92
NEK3P51956 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.06□□□□□ -1.92
NEK3P51956 AL035425.3-201ENST00000564206 4996 ntBASIC3.06□□□□□ -1.92
NEK3P51956 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
NEK3P51956 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
NEK3P51956 RNU6-845P-201ENST00000362578 103 ntBASIC3.05□□□□□ -1.92
NEK3P51956 RNU4-56P-201ENST00000364700 142 ntBASIC3.05□□□□□ -1.92
NEK3P51956 RNU6-142P-201ENST00000384019 107 ntBASIC3.05□□□□□ -1.92
NEK3P51956 SNORA44-201ENST00000384584 132 ntBASIC3.05□□□□□ -1.92
NEK3P51956 AL031121.1-201ENST00000406553 254 ntBASIC3.05□□□□□ -1.92
NEK3P51956 AC138393.2-201ENST00000414742 246 ntBASIC3.05□□□□□ -1.92
NEK3P51956 AC022018.1-201ENST00000430685 241 ntBASIC3.05□□□□□ -1.92
NEK3P51956 RPS29P6-201ENST00000438196 145 ntBASIC3.05□□□□□ -1.92
NEK3P51956 AL161788.1-201ENST00000441805 169 ntBASIC3.05□□□□□ -1.92
NEK3P51956 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.05□□□□□ -1.92
NEK3P51956 MTND1P17-201ENST00000448961 204 ntBASIC3.05□□□□□ -1.92
NEK3P51956 RPS29P27-201ENST00000463711 170 ntBASIC3.05□□□□□ -1.92
NEK3P51956 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.05□□□□□ -1.92
NEK3P51956 CKS1BP2-201ENST00000497342 240 ntBASIC3.05□□□□□ -1.92
NEK3P51956 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.05□□□□□ -1.92
NEK3P51956 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.05□□□□□ -1.92
NEK3P51956 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.05□□□□□ -1.92
NEK3P51956 AP005639.2-201ENST00000527592 928 ntBASIC3.05□□□□□ -1.92
NEK3P51956 AC243972.3-201ENST00000539655 198 ntBASIC3.05□□□□□ -1.92
NEK3P51956 IMMP1LP2-201ENST00000552954 492 ntBASIC3.05□□□□□ -1.92
NEK3P51956 AC078795.3-201ENST00000602913 472 ntBASIC3.05□□□□□ -1.92
NEK3P51956 AC009233.1-201ENST00000616477 371 ntBASIC3.05□□□□□ -1.92
NEK3P51956 AC022306.2-201ENST00000617563 647 ntBASIC3.05□□□□□ -1.92
NEK3P51956 U4atac.1-201ENST00000618345 95 ntBASIC3.05□□□□□ -1.92
NEK3P51956 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.05□□□□□ -1.92
NEK3P51956 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
NEK3P51956 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NEK3P51956 SNORD62.1-201ENST00000362541 86 ntBASIC3.04□□□□□ -1.92
NEK3P51956 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NEK3P51956 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NEK3P51956 MIR634-201ENST00000385208 97 ntBASIC3.04□□□□□ -1.92
NEK3P51956 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NEK3P51956 COTL1P1-201ENST00000422309 375 ntBASIC3.04□□□□□ -1.92
NEK3P51956 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.04□□□□□ -1.92
NEK3P51956 AC098614.3-201ENST00000438957 440 ntBASIC3.04□□□□□ -1.92
NEK3P51956 PCMTD1P1-201ENST00000455560 355 ntBASIC3.04□□□□□ -1.92
NEK3P51956 MTND1P11-201ENST00000456661 876 ntBASIC3.04□□□□□ -1.92
NEK3P51956 RPS3P1-201ENST00000456781 192 ntBASIC3.04□□□□□ -1.92
NEK3P51956 PPP1R2P5-201ENST00000457256 603 ntBASIC3.04□□□□□ -1.92
NEK3P51956 RNU6-567P-201ENST00000516746 107 ntBASIC3.04□□□□□ -1.92
NEK3P51956 RNU6-1088P-201ENST00000516850 104 ntBASIC3.04□□□□□ -1.92
NEK3P51956 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.04□□□□□ -1.92
NEK3P51956 AC021231.3-201ENST00000558497 370 ntBASIC3.04□□□□□ -1.92
NEK3P51956 LARP7P3-201ENST00000579888 337 ntBASIC3.04□□□□□ -1.92
NEK3P51956 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.04□□□□□ -1.92
NEK3P51956 AL138963.2-201ENST00000605137 226 ntBASIC3.04□□□□□ -1.92
NEK3P51956 RPL23AP88-201ENST00000605759 454 ntBASIC3.04□□□□□ -1.92
NEK3P51956 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.04□□□□□ -1.92
NEK3P51956 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.04□□□□□ -1.92
NEK3P51956 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NEK3P51956 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms