Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.78□□□□□ -2.12
LHX2P50458 SNORA43.2-201ENST00000516652 128 ntBASIC1.78□□□□□ -2.12
LHX2P50458 RNU6-835P-201ENST00000516974 104 ntBASIC1.78□□□□□ -2.12
LHX2P50458 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.78□□□□□ -2.12
LHX2P50458 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.78□□□□□ -2.12
LHX2P50458 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.78□□□□□ -2.12
LHX2P50458 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.78□□□□□ -2.12
LHX2P50458 MIR5089-201ENST00000580047 84 ntBASIC1.78□□□□□ -2.12
LHX2P50458 MIR4765-201ENST00000585007 77 ntBASIC1.78□□□□□ -2.12
LHX2P50458 AC025165.5-201ENST00000602802 578 ntBASIC1.78□□□□□ -2.12
LHX2P50458 RNU6-91P-201ENST00000607774 107 ntBASIC1.78□□□□□ -2.12
LHX2P50458 AC026585.1-201ENST00000619582 524 ntBASIC1.78□□□□□ -2.12
LHX2P50458 AC139792.2-201ENST00000624218 587 ntBASIC1.78□□□□□ -2.12
LHX2P50458 SCARNA4-202ENST00000625402 129 ntBASIC1.78□□□□□ -2.12
LHX2P50458 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
LHX2P50458 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LHX2P50458 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.13
LHX2P50458 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
LHX2P50458 MTND4P27-201ENST00000450813 1354 ntBASIC1.77□□□□□ -2.13
LHX2P50458 Y_RNA.3-201ENST00000362331 103 ntBASIC1.77□□□□□ -2.13
LHX2P50458 RNU6-858P-201ENST00000362436 107 ntBASIC1.77□□□□□ -2.13
LHX2P50458 Y_RNA.480-201ENST00000384364 102 ntBASIC1.77□□□□□ -2.13
LHX2P50458 RNU6-843P-201ENST00000384454 104 ntBASIC1.77□□□□□ -2.13
LHX2P50458 AL133475.1-201ENST00000404414 305 ntBASIC1.77□□□□□ -2.13
LHX2P50458 SRIP2-201ENST00000428470 166 ntBASIC1.77□□□□□ -2.13
LHX2P50458 GPM6BP3-201ENST00000442797 145 ntBASIC1.77□□□□□ -2.13
LHX2P50458 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.77□□□□□ -2.13
LHX2P50458 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.77□□□□□ -2.13
LHX2P50458 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.77□□□□□ -2.13
LHX2P50458 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.77□□□□□ -2.13
LHX2P50458 RNU6-717P-201ENST00000459076 104 ntBASIC1.77□□□□□ -2.13
LHX2P50458 AC025033.1-201ENST00000463883 194 ntBASIC1.77□□□□□ -2.13
LHX2P50458 AC090515.1-201ENST00000465295 476 ntBASIC1.77□□□□□ -2.13
LHX2P50458 MED28P2-201ENST00000475771 317 ntBASIC1.77□□□□□ -2.13
LHX2P50458 RPL21P99-201ENST00000480369 423 ntBASIC1.77□□□□□ -2.13
LHX2P50458 RPL36AP48-201ENST00000485521 314 ntBASIC1.77□□□□□ -2.13
LHX2P50458 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.77□□□□□ -2.13
LHX2P50458 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.77□□□□□ -2.13
LHX2P50458 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.77□□□□□ -2.13
LHX2P50458 MIR514B-201ENST00000516774 80 ntBASIC1.77□□□□□ -2.13
LHX2P50458 SCARNA3-201ENST00000517097 143 ntBASIC1.77□□□□□ -2.13
LHX2P50458 MTND4P7-201ENST00000523876 130 ntBASIC1.77□□□□□ -2.13
LHX2P50458 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
LHX2P50458 AL512360.1-201ENST00000555346 234 ntBASIC1.77□□□□□ -2.13
LHX2P50458 AL138976.2-201ENST00000563989 694 ntBASIC1.77□□□□□ -2.13
LHX2P50458 MIR5583-1-201ENST00000580941 59 ntBASIC1.77□□□□□ -2.13
LHX2P50458 MIR4448-201ENST00000584360 86 ntBASIC1.77□□□□□ -2.13
LHX2P50458 AC002984.1-201ENST00000591692 448 ntBASIC1.77□□□□□ -2.13
LHX2P50458 AC009314.1-201ENST00000603871 304 ntBASIC1.77□□□□□ -2.13
LHX2P50458 AC093788.1-201ENST00000609356 927 ntBASIC1.77□□□□□ -2.13
LHX2P50458 uc_338.34-201ENST00000617467 174 ntBASIC1.77□□□□□ -2.13
LHX2P50458 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.77□□□□□ -2.13
LHX2P50458 Z69720.2-201ENST00000624755 279 ntBASIC1.77□□□□□ -2.13
LHX2P50458 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
LHX2P50458 MTND4P1-201ENST00000457501 1466 ntBASIC1.76□□□□□ -2.13
LHX2P50458 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.76□□□□□ -2.13
LHX2P50458 AC138393.1-203ENST00000327086 343 ntBASIC1.76□□□□□ -2.13
LHX2P50458 RNA5SP160-201ENST00000364866 120 ntBASIC1.76□□□□□ -2.13
LHX2P50458 RNA5SP138-201ENST00000365098 114 ntBASIC1.76□□□□□ -2.13
LHX2P50458 Y_RNA.372-201ENST00000365599 102 ntBASIC1.76□□□□□ -2.13
LHX2P50458 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
LHX2P50458 RNU6-38P-201ENST00000384085 107 ntBASIC1.76□□□□□ -2.13
LHX2P50458 RNU6-483P-201ENST00000384088 108 ntBASIC1.76□□□□□ -2.13
LHX2P50458 RNU6-780P-201ENST00000391030 104 ntBASIC1.76□□□□□ -2.13
LHX2P50458 AL606923.1-201ENST00000406616 190 ntBASIC1.76□□□□□ -2.13
LHX2P50458 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.76□□□□□ -2.13
LHX2P50458 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.76□□□□□ -2.13
LHX2P50458 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.76□□□□□ -2.13
LHX2P50458 AC074117.2-201ENST00000417130 397 ntBASIC1.76□□□□□ -2.13
LHX2P50458 AC097463.2-201ENST00000421074 142 ntBASIC1.76□□□□□ -2.13
LHX2P50458 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.76□□□□□ -2.13
LHX2P50458 TOMM20P4-201ENST00000427861 435 ntBASIC1.76□□□□□ -2.13
LHX2P50458 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.76□□□□□ -2.13
LHX2P50458 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.76□□□□□ -2.13
LHX2P50458 AC006026.2-201ENST00000457376 180 ntBASIC1.76□□□□□ -2.13
LHX2P50458 RNU6-333P-201ENST00000459117 107 ntBASIC1.76□□□□□ -2.13
LHX2P50458 RNU7-167P-201ENST00000459160 62 ntBASIC1.76□□□□□ -2.13
LHX2P50458 CCDC34P1-201ENST00000507441 517 ntBASIC1.76□□□□□ -2.13
LHX2P50458 AC079140.5-201ENST00000507882 310 ntBASIC1.76□□□□□ -2.13
LHX2P50458 MTCYBP40-201ENST00000509390 1135 ntBASIC1.76□□□□□ -2.13
LHX2P50458 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.76□□□□□ -2.13
LHX2P50458 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.76□□□□□ -2.13
LHX2P50458 RNA5SP401-201ENST00000515920 127 ntBASIC1.76□□□□□ -2.13
LHX2P50458 RNU6-314P-201ENST00000516574 104 ntBASIC1.76□□□□□ -2.13
LHX2P50458 SNORA25.17-201ENST00000517184 124 ntBASIC1.76□□□□□ -2.13
LHX2P50458 CYCSP26-201ENST00000534107 320 ntBASIC1.76□□□□□ -2.13
LHX2P50458 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.76□□□□□ -2.13
LHX2P50458 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.76□□□□□ -2.13
LHX2P50458 AC079598.5-201ENST00000547460 117 ntBASIC1.76□□□□□ -2.13
LHX2P50458 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.76□□□□□ -2.13
LHX2P50458 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.76□□□□□ -2.13
LHX2P50458 HMGB1P33-201ENST00000563485 527 ntBASIC1.76□□□□□ -2.13
LHX2P50458 MIR3941-201ENST00000582572 103 ntBASIC1.76□□□□□ -2.13
LHX2P50458 AL021997.1-201ENST00000605757 193 ntBASIC1.76□□□□□ -2.13
LHX2P50458 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
LHX2P50458 AC024581.2-201ENST00000619986 252 ntBASIC1.76□□□□□ -2.13
LHX2P50458 AC244517.12-201ENST00000623581 663 ntBASIC1.76□□□□□ -2.13
LHX2P50458 AP003400.5-201ENST00000624827 617 ntBASIC1.76□□□□□ -2.13
LHX2P50458 MIR7157-201ENST00000635801 60 ntBASIC1.76□□□□□ -2.13
LHX2P50458 MIR3529-201ENST00000637713 78 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 394.5 ms