Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RNU6-37P-201ENST00000362692 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-11P-201ENST00000364234 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU4-42P-201ENST00000364738 142 ntBASIC3.77□□□□□ -1.81
MRE11P49959 SNORD14.1-201ENST00000365609 90 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-25P-201ENST00000383873 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-1-201ENST00000383898 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-48P-201ENST00000384161 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-36P-201ENST00000384172 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-4P-201ENST00000384205 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-5P-201ENST00000384238 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-3P-201ENST00000384314 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-784P-201ENST00000384330 106 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-16P-201ENST00000384385 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-933P-201ENST00000384424 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 Y_RNA.512-201ENST00000384518 102 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-15P-201ENST00000384534 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-2-201ENST00000384627 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-29P-201ENST00000384637 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-9-201ENST00000384776 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-33P-201ENST00000384793 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 MT-TR-201ENST00000387439 65 ntBASIC3.77□□□□□ -1.81
MRE11P49959 MIR1252-201ENST00000408861 65 ntBASIC3.77□□□□□ -1.81
MRE11P49959 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.77□□□□□ -1.81
MRE11P49959 TRIAP1P1-201ENST00000427062 225 ntBASIC3.77□□□□□ -1.81
MRE11P49959 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.77□□□□□ -1.81
MRE11P49959 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.77□□□□□ -1.81
MRE11P49959 AL513124.1-201ENST00000450410 614 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-1037P-201ENST00000459571 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.77□□□□□ -1.81
MRE11P49959 HMGN2P13-201ENST00000476476 274 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RPL22P13-201ENST00000493291 347 ntBASIC3.77□□□□□ -1.81
MRE11P49959 AL359273.1-201ENST00000510918 627 ntBASIC3.77□□□□□ -1.81
MRE11P49959 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.77□□□□□ -1.81
MRE11P49959 RN7SKP43-201ENST00000516173 320 ntBASIC3.77□□□□□ -1.81
MRE11P49959 AC131281.1-201ENST00000522984 164 ntBASIC3.77□□□□□ -1.81
MRE11P49959 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.77□□□□□ -1.81
MRE11P49959 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.77□□□□□ -1.81
MRE11P49959 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.77□□□□□ -1.81
MRE11P49959 AC016727.2-201ENST00000603988 621 ntBASIC3.77□□□□□ -1.81
MRE11P49959 RNU6-6P-201ENST00000606623 107 ntBASIC3.77□□□□□ -1.81
MRE11P49959 AL355810.1-201ENST00000614629 552 ntBASIC3.77□□□□□ -1.81
MRE11P49959 AL138825.1-201ENST00000618587 192 ntBASIC3.77□□□□□ -1.81
MRE11P49959 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.77□□□□□ -1.81
MRE11P49959 AC090740.1-201ENST00000623193 2262 ntBASIC3.77□□□□□ -1.81
MRE11P49959 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
MRE11P49959 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.77□□□□□ -1.81
MRE11P49959 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MRE11P49959 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
MRE11P49959 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MRE11P49959 Y_RNA.210-201ENST00000364161 110 ntBASIC3.76□□□□□ -1.81
MRE11P49959 RNU6-1317P-201ENST00000364582 104 ntBASIC3.76□□□□□ -1.81
MRE11P49959 U8.8-201ENST00000365399 135 ntBASIC3.76□□□□□ -1.81
MRE11P49959 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.76□□□□□ -1.81
MRE11P49959 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.76□□□□□ -1.81
MRE11P49959 RPL21P2-201ENST00000440049 481 ntBASIC3.76□□□□□ -1.81
MRE11P49959 NDUFB1P2-201ENST00000449477 176 ntBASIC3.76□□□□□ -1.81
MRE11P49959 AL160314.1-201ENST00000490836 438 ntBASIC3.76□□□□□ -1.81
MRE11P49959 SNORA40.14-201ENST00000516543 86 ntBASIC3.76□□□□□ -1.81
MRE11P49959 ATP5F1P5-201ENST00000526403 760 ntBASIC3.76□□□□□ -1.81
MRE11P49959 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.76□□□□□ -1.81
MRE11P49959 MIR4435-1-201ENST00000582552 80 ntBASIC3.76□□□□□ -1.81
MRE11P49959 MIR5188-201ENST00000583467 113 ntBASIC3.76□□□□□ -1.81
MRE11P49959 AC090132.2-201ENST00000615881 347 ntBASIC3.76□□□□□ -1.81
MRE11P49959 AC091903.1-201ENST00000624322 454 ntBASIC3.76□□□□□ -1.81
MRE11P49959 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.75□□□□□ -1.81
MRE11P49959 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.75□□□□□ -1.81
MRE11P49959 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.75□□□□□ -1.81
MRE11P49959 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
MRE11P49959 Y_RNA.152-201ENST00000363578 100 ntBASIC3.75□□□□□ -1.81
MRE11P49959 Y_RNA.245-201ENST00000364493 95 ntBASIC3.75□□□□□ -1.81
MRE11P49959 SNORD14B-201ENST00000364533 90 ntBASIC3.75□□□□□ -1.81
MRE11P49959 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
MRE11P49959 AL591034.2-201ENST00000402839 359 ntBASIC3.75□□□□□ -1.81
MRE11P49959 SNORD56-201ENST00000413522 71 ntBASIC3.75□□□□□ -1.81
MRE11P49959 AC003685.2-201ENST00000422795 395 ntBASIC3.75□□□□□ -1.81
MRE11P49959 RPL27AP8-201ENST00000424277 446 ntBASIC3.75□□□□□ -1.81
MRE11P49959 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.75□□□□□ -1.81
MRE11P49959 RPS15AP10-201ENST00000432472 382 ntBASIC3.75□□□□□ -1.81
MRE11P49959 AC092573.2-201ENST00000434546 243 ntBASIC3.75□□□□□ -1.81
MRE11P49959 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.75□□□□□ -1.81
MRE11P49959 AC010095.1-201ENST00000443543 144 ntBASIC3.75□□□□□ -1.81
MRE11P49959 CECR9-201ENST00000453421 199 ntBASIC3.75□□□□□ -1.81
MRE11P49959 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.75□□□□□ -1.81
MRE11P49959 SNORA31.8-201ENST00000516327 108 ntBASIC3.75□□□□□ -1.81
MRE11P49959 Y_RNA.687-201ENST00000516558 91 ntBASIC3.75□□□□□ -1.81
MRE11P49959 Y_RNA.715-201ENST00000517082 110 ntBASIC3.75□□□□□ -1.81
MRE11P49959 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
MRE11P49959 AC007536.1-201ENST00000533382 349 ntBASIC3.75□□□□□ -1.81
MRE11P49959 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.75□□□□□ -1.81
MRE11P49959 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.75□□□□□ -1.81
MRE11P49959 AL158827.2-201ENST00000602494 330 ntBASIC3.75□□□□□ -1.81
MRE11P49959 AP000787.2-201ENST00000604432 568 ntBASIC3.75□□□□□ -1.81
MRE11P49959 AL110115.1-201ENST00000614396 364 ntBASIC3.75□□□□□ -1.81
MRE11P49959 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.75□□□□□ -1.81
MRE11P49959 U2.1-201ENST00000618978 145 ntBASIC3.75□□□□□ -1.81
MRE11P49959 U4.6-201ENST00000621618 127 ntBASIC3.75□□□□□ -1.81
MRE11P49959 AL691447.3-201ENST00000635020 330 ntBASIC3.75□□□□□ -1.81
MRE11P49959 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.75□□□□□ -1.81
MRE11P49959 ZNF72P-201ENST00000425869 1908 ntBASIC3.75□□□□□ -1.81
MRE11P49959 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms