Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.61□□□□□ -2.15
CX3CR1P49238 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.61□□□□□ -2.15
CX3CR1P49238 RN7SKP256-201ENST00000517201 314 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.61□□□□□ -2.15
CX3CR1P49238 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.61□□□□□ -2.15
CX3CR1P49238 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.61□□□□□ -2.15
CX3CR1P49238 MIR4648-201ENST00000580107 72 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 BNIP3P25-201ENST00000596023 559 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 AC245014.2-201ENST00000603689 287 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 AC025449.1-201ENST00000603896 529 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 AC025811.1-201ENST00000604312 472 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 AC246785.4-201ENST00000605374 287 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 AC087241.4-201ENST00000612441 480 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 RMST_4.1-201ENST00000616886 107 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CX3CR1P49238 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.61□□□□□ -2.15
CX3CR1P49238 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CX3CR1P49238 RNU6-715P-201ENST00000365204 103 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
CX3CR1P49238 SNORD14D-201ENST00000384390 87 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 MIR29B2-201ENST00000385055 81 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 RNU6-607P-201ENST00000411283 108 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.6□□□□□ -2.15
CX3CR1P49238 BTF3L4P1-201ENST00000413813 468 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 AC090960.1-201ENST00000421072 306 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 TOMM20P4-201ENST00000427861 435 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 AC133104.1-201ENST00000429100 218 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.6□□□□□ -2.15
CX3CR1P49238 MTND1P18-201ENST00000448191 573 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 FDX1P2-201ENST00000450769 375 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 C1DP4-201ENST00000455429 424 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 RNA5SP57-201ENST00000459463 123 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 ARL2BPP4-201ENST00000506854 471 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 AC010486.3-201ENST00000511602 785 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.6□□□□□ -2.15
CX3CR1P49238 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.6□□□□□ -2.15
CX3CR1P49238 AP005435.4-201ENST00000529514 284 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.6□□□□□ -2.15
CX3CR1P49238 AL590229.1-201ENST00000603497 542 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 AC087752.4-201ENST00000605911 462 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 AC063943.3-201ENST00000615562 356 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 AC097520.1-201ENST00000624435 385 ntBASIC1.6□□□□□ -2.15
CX3CR1P49238 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
CX3CR1P49238 AC002543.1-201ENST00000299783 1954 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CX3CR1P49238 RNU6-1164P-201ENST00000364428 107 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 RNU6-45P-201ENST00000384471 107 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 RNU6-456P-201ENST00000384493 107 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 RNU6-606P-201ENST00000384721 111 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 BTF3L4P2-201ENST00000392798 346 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 RAP1BP3-201ENST00000407180 549 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 RNU2-9P-201ENST00000410194 145 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 SRIP3-201ENST00000413200 219 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.59□□□□□ -2.15
CX3CR1P49238 PIGFP2-201ENST00000421400 651 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.59□□□□□ -2.15
CX3CR1P49238 HSPE1P21-201ENST00000438283 308 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.59□□□□□ -2.15
CX3CR1P49238 AC079781.2-201ENST00000446424 169 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 TPT1P7-201ENST00000458300 517 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.59□□□□□ -2.15
CX3CR1P49238 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.59□□□□□ -2.15
CX3CR1P49238 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.59□□□□□ -2.15
CX3CR1P49238 MIR4419B-201ENST00000577260 68 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 MIR4703-201ENST00000577728 79 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 MIR5692A1-201ENST00000580523 69 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 MIR5583-1-201ENST00000580941 59 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 RSL24D1P11-201ENST00000591045 491 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.59□□□□□ -2.15
CX3CR1P49238 AC091834.1-201ENST00000614543 472 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 AC008147.4-201ENST00000617570 1204 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 AL159153.1-201ENST00000619688 317 ntBASIC1.59□□□□□ -2.15
CX3CR1P49238 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.58□□□□□ -2.16
CX3CR1P49238 RNU6-1097P-201ENST00000363586 107 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 Y_RNA.359-201ENST00000365498 102 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 Y_RNA.381-201ENST00000365666 102 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 Y_RNA.553-201ENST00000384670 102 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 Y_RNA.597-201ENST00000410463 100 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 RN7SKP284-201ENST00000411002 343 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.58□□□□□ -2.16
CX3CR1P49238 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CX3CR1P49238 AL596276.1-201ENST00000434465 418 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 IFNA20P-201ENST00000436840 528 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 MTCO2P16-201ENST00000436962 677 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 AC003989.2-201ENST00000440224 169 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.58□□□□□ -2.16
CX3CR1P49238 RPL21P99-201ENST00000480369 423 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 RPL30P1-201ENST00000488676 339 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 MTCYBP40-201ENST00000509390 1135 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 RNU6-1178P-201ENST00000516674 107 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.58□□□□□ -2.16
CX3CR1P49238 GNAI2P1-201ENST00000541815 315 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 AC018630.3-201ENST00000542637 96 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 AC007375.1-201ENST00000554513 578 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 AC008752.3-201ENST00000588113 712 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 AL391646.1-201ENST00000603860 190 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 AC123912.5-201ENST00000605470 343 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 AL022345.1-201ENST00000607292 135 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms