Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.59□□□□□ -2.15
CXCL12P48061 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.59□□□□□ -2.15
CXCL12P48061 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.59□□□□□ -2.16
CXCL12P48061 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.59□□□□□ -2.16
CXCL12P48061 RNA5SP138-201ENST00000365098 114 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 RNU6-843P-201ENST00000384454 104 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 RN7SKP142-201ENST00000411236 328 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 RNU6-387P-201ENST00000411331 105 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 RN7SKP101-201ENST00000411376 320 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.58□□□□□ -2.16
CXCL12P48061 OR6C66P-201ENST00000414917 930 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 AC138623.1-201ENST00000418060 216 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 BX510359.4-201ENST00000423750 193 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.58□□□□□ -2.16
CXCL12P48061 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.58□□□□□ -2.16
CXCL12P48061 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.58□□□□□ -2.16
CXCL12P48061 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.58□□□□□ -2.16
CXCL12P48061 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.58□□□□□ -2.16
CXCL12P48061 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.58□□□□□ -2.16
CXCL12P48061 HMGB3P17-201ENST00000504195 649 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 MTND3P25-201ENST00000509243 135 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 SNORA31.24-201ENST00000517232 57 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.58□□□□□ -2.16
CXCL12P48061 AP004607.1-201ENST00000524456 203 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 OSBPL9P5-201ENST00000542581 171 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.58□□□□□ -2.16
CXCL12P48061 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.58□□□□□ -2.16
CXCL12P48061 ANP32BP3-201ENST00000559213 706 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 AC136619.2-201ENST00000563361 631 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 MIR4452-201ENST00000583004 71 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CXCL12P48061 AL713866.2-201ENST00000603579 219 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 AC121247.2-201ENST00000604776 136 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 AC073114.1-201ENST00000612027 490 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 AC011155.2-201ENST00000623202 216 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.58□□□□□ -2.16
CXCL12P48061 U6.114-201ENST00000636407 96 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 MTND5P17-201ENST00000418405 1603 ntBASIC1.58□□□□□ -2.16
CXCL12P48061 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
CXCL12P48061 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
CXCL12P48061 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CXCL12P48061 SNORD114-19-201ENST00000363072 75 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 RNU6-1032P-201ENST00000384100 107 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 RNY1P14-201ENST00000384426 108 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 RNU1-148P-201ENST00000384472 162 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 SNORD116-20-201ENST00000384529 92 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 RNU6-550P-201ENST00000391057 101 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CXCL12P48061 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CXCL12P48061 UBE2V1P10-201ENST00000414685 269 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.57□□□□□ -2.16
CXCL12P48061 AC008267.5-201ENST00000424928 265 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.57□□□□□ -2.16
CXCL12P48061 AC079781.2-201ENST00000446424 169 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 AC079448.1-201ENST00000449377 373 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.57□□□□□ -2.16
CXCL12P48061 PMCHL2-203ENST00000457791 237 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 RNU1-123P-201ENST00000458950 160 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.57□□□□□ -2.16
CXCL12P48061 AC026407.1-201ENST00000518369 204 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 AP003072.2-201ENST00000527756 676 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.57□□□□□ -2.16
CXCL12P48061 CR383656.8-201ENST00000549046 145 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 BNIP3P6-201ENST00000549284 499 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.57□□□□□ -2.16
CXCL12P48061 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.57□□□□□ -2.16
CXCL12P48061 MIR5692A1-201ENST00000580523 69 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 MIR4775-201ENST00000581168 75 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 AC245014.2-201ENST00000603689 287 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 AL355297.2-201ENST00000604792 129 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 AC246785.4-201ENST00000605374 287 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 AC021646.1-201ENST00000605469 484 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 NDUFA8P1-201ENST00000605525 367 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 AC098614.4-201ENST00000607601 462 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 MIR5739-201ENST00000619803 80 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 AC078883.4-201ENST00000623218 367 ntBASIC1.57□□□□□ -2.16
CXCL12P48061 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CXCL12P48061 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CXCL12P48061 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CXCL12P48061 RNU6-1287P-201ENST00000362914 107 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNU6-108P-201ENST00000365558 107 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNU6-1-201ENST00000383898 107 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNU6-42P-201ENST00000384165 107 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNU6-36P-201ENST00000384172 107 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNU6-4P-201ENST00000384205 107 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNU6-5P-201ENST00000384238 107 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNU6-3P-201ENST00000384314 107 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 SNORD116-8-201ENST00000384365 95 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNU6-456P-201ENST00000384493 107 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNU6-2-201ENST00000384627 107 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNU6-1060P-201ENST00000384664 107 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNU6-9-201ENST00000384776 107 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNU6-33P-201ENST00000384793 107 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 MIR454-201ENST00000390180 115 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNA5SP338-201ENST00000410495 85 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNU2-63P-201ENST00000410792 194 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 RNA5SP489-201ENST00000410986 109 ntBASIC1.56□□□□□ -2.16
CXCL12P48061 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.56□□□□□ -2.16
CXCL12P48061 AIMP1P2-201ENST00000425294 312 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms