Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RNU6-25P-201ENST00000383873 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-1-201ENST00000383898 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-48P-201ENST00000384161 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-36P-201ENST00000384172 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-4P-201ENST00000384205 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-5P-201ENST00000384238 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-3P-201ENST00000384314 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-16P-201ENST00000384385 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-15P-201ENST00000384534 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 Y_RNA.533-201ENST00000384596 114 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-2-201ENST00000384627 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-29P-201ENST00000384637 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-9-201ENST00000384776 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-33P-201ENST00000384793 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 MT-TW-201ENST00000387382 68 ntBASIC3.09□□□□□ -1.91
MMP13P45452 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
MMP13P45452 RNU1-101P-201ENST00000391171 127 ntBASIC3.09□□□□□ -1.91
MMP13P45452 SNORD88.1-201ENST00000408684 91 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-101P-201ENST00000410323 104 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-1156P-201ENST00000410365 100 ntBASIC3.09□□□□□ -1.91
MMP13P45452 Y_RNA.618-201ENST00000410949 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.09□□□□□ -1.91
MMP13P45452 ELOCP20-201ENST00000422460 345 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RPL21P40-201ENST00000428586 483 ntBASIC3.09□□□□□ -1.91
MMP13P45452 AC092573.2-201ENST00000434546 243 ntBASIC3.09□□□□□ -1.91
MMP13P45452 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.09□□□□□ -1.91
MMP13P45452 DYNLT3P2-201ENST00000442517 295 ntBASIC3.09□□□□□ -1.91
MMP13P45452 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.09□□□□□ -1.91
MMP13P45452 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.09□□□□□ -1.91
MMP13P45452 RPL17P19-201ENST00000489069 552 ntBASIC3.09□□□□□ -1.91
MMP13P45452 AC107222.1-201ENST00000510899 637 ntBASIC3.09□□□□□ -1.91
MMP13P45452 AC008885.1-201ENST00000514930 301 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-388P-201ENST00000517012 105 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-389P-201ENST00000517048 105 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RN7SKP57-201ENST00000517248 293 ntBASIC3.09□□□□□ -1.91
MMP13P45452 AC069113.1-201ENST00000517763 267 ntBASIC3.09□□□□□ -1.91
MMP13P45452 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.09□□□□□ -1.91
MMP13P45452 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.09□□□□□ -1.91
MMP13P45452 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.09□□□□□ -1.91
MMP13P45452 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.09□□□□□ -1.91
MMP13P45452 HSBP1P1-201ENST00000555205 166 ntBASIC3.09□□□□□ -1.91
MMP13P45452 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.09□□□□□ -1.91
MMP13P45452 AC005899.2-201ENST00000584353 90 ntBASIC3.09□□□□□ -1.91
MMP13P45452 RNU6-6P-201ENST00000606623 107 ntBASIC3.09□□□□□ -1.91
MMP13P45452 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.09□□□□□ -1.91
MMP13P45452 AL138880.2-201ENST00000616214 239 ntBASIC3.09□□□□□ -1.91
MMP13P45452 U2.1-201ENST00000618978 145 ntBASIC3.09□□□□□ -1.91
MMP13P45452 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.09□□□□□ -1.91
MMP13P45452 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
MMP13P45452 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
MMP13P45452 AC008669.1-201ENST00000565823 2178 ntBASIC3.08□□□□□ -1.92
MMP13P45452 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MMP13P45452 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
MMP13P45452 AC108206.1-201ENST00000570186 4159 ntBASIC3.08□□□□□ -1.92
MMP13P45452 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MMP13P45452 RNA5SP387-201ENST00000364226 106 ntBASIC3.08□□□□□ -1.92
MMP13P45452 U8.8-201ENST00000365399 135 ntBASIC3.08□□□□□ -1.92
MMP13P45452 RN7SKP220-201ENST00000410611 288 ntBASIC3.08□□□□□ -1.92
MMP13P45452 RNU6-1025P-201ENST00000410629 104 ntBASIC3.08□□□□□ -1.92
MMP13P45452 AC099799.1-201ENST00000439809 192 ntBASIC3.08□□□□□ -1.92
MMP13P45452 RN7SL499P-201ENST00000481141 276 ntBASIC3.08□□□□□ -1.92
MMP13P45452 AC104564.1-201ENST00000493028 407 ntBASIC3.08□□□□□ -1.92
MMP13P45452 AC139453.3-201ENST00000493276 369 ntBASIC3.08□□□□□ -1.92
MMP13P45452 MTND1P19-201ENST00000511780 315 ntBASIC3.08□□□□□ -1.92
MMP13P45452 MIR892C-201ENST00000516410 77 ntBASIC3.08□□□□□ -1.92
MMP13P45452 RNU6-1256P-201ENST00000516539 103 ntBASIC3.08□□□□□ -1.92
MMP13P45452 Y_RNA.715-201ENST00000517082 110 ntBASIC3.08□□□□□ -1.92
MMP13P45452 RNU6-264P-201ENST00000517134 104 ntBASIC3.08□□□□□ -1.92
MMP13P45452 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.08□□□□□ -1.92
MMP13P45452 AC023442.1-201ENST00000531247 422 ntBASIC3.08□□□□□ -1.92
MMP13P45452 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.08□□□□□ -1.92
MMP13P45452 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.08□□□□□ -1.92
MMP13P45452 RAC1P9-201ENST00000604990 392 ntBASIC3.08□□□□□ -1.92
MMP13P45452 AC011373.1-201ENST00000607270 237 ntBASIC3.08□□□□□ -1.92
MMP13P45452 MIR1244-1-201ENST00000612829 85 ntBASIC3.08□□□□□ -1.92
MMP13P45452 MIR1244-3-201ENST00000635744 85 ntBASIC3.08□□□□□ -1.92
MMP13P45452 MIR1244-2-201ENST00000636449 85 ntBASIC3.08□□□□□ -1.92
MMP13P45452 MIR1244-4-202ENST00000636813 85 ntBASIC3.08□□□□□ -1.92
MMP13P45452 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.08□□□□□ -1.92
MMP13P45452 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
MMP13P45452 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
MMP13P45452 RNU6-874P-201ENST00000362390 105 ntBASIC3.07□□□□□ -1.92
MMP13P45452 Y_RNA.39-201ENST00000362620 98 ntBASIC3.07□□□□□ -1.92
MMP13P45452 RNY1P16-201ENST00000363063 111 ntBASIC3.07□□□□□ -1.92
MMP13P45452 Y_RNA.214-201ENST00000364201 112 ntBASIC3.07□□□□□ -1.92
MMP13P45452 SNORA71.1-201ENST00000364523 117 ntBASIC3.07□□□□□ -1.92
MMP13P45452 SNORD14B-201ENST00000364533 90 ntBASIC3.07□□□□□ -1.92
MMP13P45452 SNORA14A-201ENST00000364773 135 ntBASIC3.07□□□□□ -1.92
MMP13P45452 RNU6-790P-201ENST00000384479 105 ntBASIC3.07□□□□□ -1.92
MMP13P45452 Y_RNA.577-201ENST00000384794 101 ntBASIC3.07□□□□□ -1.92
MMP13P45452 SNORA48.8-201ENST00000391324 134 ntBASIC3.07□□□□□ -1.92
MMP13P45452 MIR1252-201ENST00000408861 65 ntBASIC3.07□□□□□ -1.92
MMP13P45452 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
MMP13P45452 SNORD56-201ENST00000413522 71 ntBASIC3.07□□□□□ -1.92
MMP13P45452 PGBD4P6-201ENST00000421501 610 ntBASIC3.07□□□□□ -1.92
MMP13P45452 ARL5AP4-201ENST00000430731 512 ntBASIC3.07□□□□□ -1.92
MMP13P45452 DAP3P1-201ENST00000441522 278 ntBASIC3.07□□□□□ -1.92
MMP13P45452 OR2AQ1P-201ENST00000451972 200 ntBASIC3.07□□□□□ -1.92
MMP13P45452 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.07□□□□□ -1.92
MMP13P45452 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 191.6 ms