Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AL513475.1-201ENST00000406602 315 ntBASIC2.29□□□□□ -2.04
SOX3P41225 SNORA11.2-201ENST00000408318 127 ntBASIC2.29□□□□□ -2.04
SOX3P41225 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.29□□□□□ -2.04
SOX3P41225 VN1R36P-201ENST00000414936 291 ntBASIC2.29□□□□□ -2.04
SOX3P41225 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SOX3P41225 MTCO2P3-201ENST00000442543 421 ntBASIC2.29□□□□□ -2.04
SOX3P41225 AC009296.1-201ENST00000443146 155 ntBASIC2.29□□□□□ -2.04
SOX3P41225 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.29□□□□□ -2.04
SOX3P41225 EEF1B2P7-201ENST00000451177 676 ntBASIC2.29□□□□□ -2.04
SOX3P41225 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SOX3P41225 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.29□□□□□ -2.04
SOX3P41225 AP001324.2-201ENST00000461163 319 ntBASIC2.29□□□□□ -2.04
SOX3P41225 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.29□□□□□ -2.04
SOX3P41225 MIR3672-201ENST00000584290 82 ntBASIC2.29□□□□□ -2.04
SOX3P41225 AC021646.1-201ENST00000605469 484 ntBASIC2.29□□□□□ -2.04
SOX3P41225 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.29□□□□□ -2.04
SOX3P41225 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.29□□□□□ -2.04
SOX3P41225 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SOX3P41225 RBBP8P1-201ENST00000449447 1844 ntBASIC2.28□□□□□ -2.04
SOX3P41225 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.28□□□□□ -2.04
SOX3P41225 AC010329.5-201ENST00000623497 2174 ntBASIC2.28□□□□□ -2.04
SOX3P41225 RNU6-105P-201ENST00000363909 104 ntBASIC2.28□□□□□ -2.04
SOX3P41225 Y_RNA.279-201ENST00000364763 95 ntBASIC2.28□□□□□ -2.04
SOX3P41225 XGY1-201ENST00000381172 446 ntBASIC2.28□□□□□ -2.04
SOX3P41225 RNU6-128P-201ENST00000383976 107 ntBASIC2.28□□□□□ -2.04
SOX3P41225 RNU6-214P-201ENST00000384130 107 ntBASIC2.28□□□□□ -2.04
SOX3P41225 RNU6-622P-201ENST00000384272 103 ntBASIC2.28□□□□□ -2.04
SOX3P41225 RNU6-510P-201ENST00000391239 108 ntBASIC2.28□□□□□ -2.04
SOX3P41225 RNU6-876P-201ENST00000391295 104 ntBASIC2.28□□□□□ -2.04
SOX3P41225 RPS29P13-201ENST00000402041 169 ntBASIC2.28□□□□□ -2.04
SOX3P41225 RNA5SP390-201ENST00000410191 113 ntBASIC2.28□□□□□ -2.04
SOX3P41225 RNU6-1328P-201ENST00000410938 106 ntBASIC2.28□□□□□ -2.04
SOX3P41225 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.28□□□□□ -2.04
SOX3P41225 AC138393.2-201ENST00000414742 246 ntBASIC2.28□□□□□ -2.04
SOX3P41225 AL591043.1-201ENST00000432461 424 ntBASIC2.28□□□□□ -2.04
SOX3P41225 MICF-203ENST00000432679 129 ntBASIC2.28□□□□□ -2.04
SOX3P41225 AL031274.1-201ENST00000450334 232 ntBASIC2.28□□□□□ -2.04
SOX3P41225 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.28□□□□□ -2.04
SOX3P41225 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.28□□□□□ -2.04
SOX3P41225 AC092436.3-201ENST00000511788 257 ntBASIC2.28□□□□□ -2.04
SOX3P41225 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.28□□□□□ -2.04
SOX3P41225 RNU6-864P-201ENST00000516256 108 ntBASIC2.28□□□□□ -2.04
SOX3P41225 RNU6-1332P-201ENST00000516666 104 ntBASIC2.28□□□□□ -2.04
SOX3P41225 RNU6-256P-201ENST00000516747 97 ntBASIC2.28□□□□□ -2.04
SOX3P41225 AC026241.1-201ENST00000517873 2142 ntBASIC2.28□□□□□ -2.04
SOX3P41225 AC109329.2-201ENST00000519658 482 ntBASIC2.28□□□□□ -2.04
SOX3P41225 AC107953.1-201ENST00000522216 297 ntBASIC2.28□□□□□ -2.04
SOX3P41225 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.28□□□□□ -2.04
SOX3P41225 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
SOX3P41225 AC025423.5-201ENST00000550230 219 ntBASIC2.28□□□□□ -2.04
SOX3P41225 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.28□□□□□ -2.04
SOX3P41225 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.28□□□□□ -2.04
SOX3P41225 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.28□□□□□ -2.04
SOX3P41225 AC011712.1-201ENST00000588959 234 ntBASIC2.28□□□□□ -2.04
SOX3P41225 VN1R107P-201ENST00000601784 209 ntBASIC2.28□□□□□ -2.04
SOX3P41225 AC019159.1-201ENST00000605094 187 ntBASIC2.28□□□□□ -2.04
SOX3P41225 AC009248.2-201ENST00000619826 254 ntBASIC2.28□□□□□ -2.04
SOX3P41225 AC009033.1-201ENST00000624279 431 ntBASIC2.28□□□□□ -2.04
SOX3P41225 CTSLP2-204ENST00000629029 392 ntBASIC2.28□□□□□ -2.04
SOX3P41225 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SOX3P41225 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.28□□□□□ -2.05
SOX3P41225 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SOX3P41225 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.27□□□□□ -2.05
SOX3P41225 SNORD56.1-201ENST00000362913 68 ntBASIC2.27□□□□□ -2.05
SOX3P41225 RNU6-428P-201ENST00000362942 107 ntBASIC2.27□□□□□ -2.05
SOX3P41225 RNU6-1252P-201ENST00000363054 104 ntBASIC2.27□□□□□ -2.05
SOX3P41225 RNU6-527P-201ENST00000363425 104 ntBASIC2.27□□□□□ -2.05
SOX3P41225 Y_RNA.160-201ENST00000363677 92 ntBASIC2.27□□□□□ -2.05
SOX3P41225 RNU6-336P-201ENST00000364891 107 ntBASIC2.27□□□□□ -2.05
SOX3P41225 RNU6-827P-201ENST00000365553 106 ntBASIC2.27□□□□□ -2.05
SOX3P41225 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SOX3P41225 SNORA32.2-201ENST00000384049 122 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AL133475.1-201ENST00000404414 305 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.27□□□□□ -2.05
SOX3P41225 MTCO3P46-201ENST00000425787 232 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.27□□□□□ -2.05
SOX3P41225 IFNA20P-201ENST00000436840 528 ntBASIC2.27□□□□□ -2.05
SOX3P41225 FABP5P14-201ENST00000437273 393 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AC007969.2-201ENST00000441891 191 ntBASIC2.27□□□□□ -2.05
SOX3P41225 RPL32P28-201ENST00000443577 397 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AC104389.3-201ENST00000445629 235 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.27□□□□□ -2.05
SOX3P41225 AC012308.1-201ENST00000451232 178 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.27□□□□□ -2.05
SOX3P41225 AC008628.2-201ENST00000502605 298 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.27□□□□□ -2.05
SOX3P41225 RNU4-49P-201ENST00000516080 140 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.27□□□□□ -2.05
SOX3P41225 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.27□□□□□ -2.05
SOX3P41225 AC134698.4-201ENST00000523451 826 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AC118273.2-201ENST00000532092 465 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.27□□□□□ -2.05
SOX3P41225 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.27□□□□□ -2.05
SOX3P41225 AC103996.1-201ENST00000555468 102 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.27□□□□□ -2.05
SOX3P41225 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.27□□□□□ -2.05
SOX3P41225 MIR4435-1-201ENST00000582552 80 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AC096772.1-201ENST00000609146 564 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AC064836.2-201ENST00000609491 462 ntBASIC2.27□□□□□ -2.05
SOX3P41225 AC093913.1-201ENST00000614178 329 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms