Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC080100.1-201ENST00000624239 5356 ntBASIC2.14□□□□□ -2.07
USP6P35125 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
USP6P35125 MTND5P35-201ENST00000557537 1720 ntBASIC2.14□□□□□ -2.07
USP6P35125 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USP6P35125 AC010329.5-201ENST00000623497 2174 ntBASIC2.13□□□□□ -2.07
USP6P35125 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
USP6P35125 RNA5SP325-201ENST00000363756 130 ntBASIC2.13□□□□□ -2.07
USP6P35125 RNY1-201ENST00000364228 113 ntBASIC2.13□□□□□ -2.07
USP6P35125 RNU6-1119P-201ENST00000384349 108 ntBASIC2.13□□□□□ -2.07
USP6P35125 MIR10A-201ENST00000385043 110 ntBASIC2.13□□□□□ -2.07
USP6P35125 RNU2-25P-201ENST00000411041 191 ntBASIC2.13□□□□□ -2.07
USP6P35125 PGBD4P6-201ENST00000421501 610 ntBASIC2.13□□□□□ -2.07
USP6P35125 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.13□□□□□ -2.07
USP6P35125 RPS4XP11-201ENST00000446897 772 ntBASIC2.13□□□□□ -2.07
USP6P35125 MTND1P29-201ENST00000448112 647 ntBASIC2.13□□□□□ -2.07
USP6P35125 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.13□□□□□ -2.07
USP6P35125 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.13□□□□□ -2.07
USP6P35125 AC022364.2-201ENST00000457963 554 ntBASIC2.13□□□□□ -2.07
USP6P35125 AC011005.2-201ENST00000487324 359 ntBASIC2.13□□□□□ -2.07
USP6P35125 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
USP6P35125 SNORA25.11-201ENST00000515935 105 ntBASIC2.13□□□□□ -2.07
USP6P35125 RNA5SP503-201ENST00000517047 117 ntBASIC2.13□□□□□ -2.07
USP6P35125 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.13□□□□□ -2.07
USP6P35125 AC015720.1-201ENST00000565251 277 ntBASIC2.13□□□□□ -2.07
USP6P35125 MIR5692A1-201ENST00000580523 69 ntBASIC2.13□□□□□ -2.07
USP6P35125 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.13□□□□□ -2.07
USP6P35125 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.13□□□□□ -2.07
USP6P35125 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.13□□□□□ -2.07
USP6P35125 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.13□□□□□ -2.07
USP6P35125 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
USP6P35125 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
USP6P35125 RNU6-1120P-201ENST00000362988 108 ntBASIC2.12□□□□□ -2.07
USP6P35125 RNU6-942P-201ENST00000363002 107 ntBASIC2.12□□□□□ -2.07
USP6P35125 SNORD14B-201ENST00000364533 90 ntBASIC2.12□□□□□ -2.07
USP6P35125 RNU6-748P-201ENST00000384648 107 ntBASIC2.12□□□□□ -2.07
USP6P35125 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.12□□□□□ -2.07
USP6P35125 MTATP6P18-201ENST00000417994 673 ntBASIC2.12□□□□□ -2.07
USP6P35125 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.12□□□□□ -2.07
USP6P35125 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.12□□□□□ -2.07
USP6P35125 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.12□□□□□ -2.07
USP6P35125 MICF-203ENST00000432679 129 ntBASIC2.12□□□□□ -2.07
USP6P35125 AL596276.1-201ENST00000434465 418 ntBASIC2.12□□□□□ -2.07
USP6P35125 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.12□□□□□ -2.07
USP6P35125 MTCO2P18-201ENST00000457151 658 ntBASIC2.12□□□□□ -2.07
USP6P35125 AL441985.1-201ENST00000457727 251 ntBASIC2.12□□□□□ -2.07
USP6P35125 RPS3AP17-201ENST00000472594 777 ntBASIC2.12□□□□□ -2.07
USP6P35125 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
USP6P35125 SCARNA3-201ENST00000517097 143 ntBASIC2.12□□□□□ -2.07
USP6P35125 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.12□□□□□ -2.07
USP6P35125 OR5AQ1P-201ENST00000527596 927 ntBASIC2.12□□□□□ -2.07
USP6P35125 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.12□□□□□ -2.07
USP6P35125 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.12□□□□□ -2.07
USP6P35125 MIR5694-201ENST00000581190 76 ntBASIC2.12□□□□□ -2.07
USP6P35125 AC073539.2-201ENST00000597113 165 ntBASIC2.12□□□□□ -2.07
USP6P35125 AL021997.1-201ENST00000605757 193 ntBASIC2.12□□□□□ -2.07
USP6P35125 AC008945.2-201ENST00000606056 604 ntBASIC2.12□□□□□ -2.07
USP6P35125 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
USP6P35125 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.12□□□□□ -2.07
USP6P35125 ZNF680P1-201ENST00000436625 1469 ntBASIC2.12□□□□□ -2.07
USP6P35125 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.12□□□□□ -2.07
USP6P35125 AL359854.1-201ENST00000614203 1594 ntBASIC2.11□□□□□ -2.07
USP6P35125 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USP6P35125 RNU6-858P-201ENST00000362436 107 ntBASIC2.11□□□□□ -2.07
USP6P35125 SNORA7.1-201ENST00000363750 139 ntBASIC2.11□□□□□ -2.07
USP6P35125 MIR144-201ENST00000384886 86 ntBASIC2.11□□□□□ -2.07
USP6P35125 RNU6-220P-201ENST00000390919 107 ntBASIC2.11□□□□□ -2.07
USP6P35125 AL353621.1-201ENST00000418219 243 ntBASIC2.11□□□□□ -2.07
USP6P35125 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.11□□□□□ -2.07
USP6P35125 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.11□□□□□ -2.07
USP6P35125 HMGN2P19-201ENST00000425149 265 ntBASIC2.11□□□□□ -2.07
USP6P35125 USP9YP14-201ENST00000430663 563 ntBASIC2.11□□□□□ -2.07
USP6P35125 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.11□□□□□ -2.07
USP6P35125 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.11□□□□□ -2.07
USP6P35125 RNU1-123P-201ENST00000458950 160 ntBASIC2.11□□□□□ -2.07
USP6P35125 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.11□□□□□ -2.07
USP6P35125 RPL36AP48-201ENST00000485521 314 ntBASIC2.11□□□□□ -2.07
USP6P35125 MRPL42P6-201ENST00000486397 371 ntBASIC2.11□□□□□ -2.07
USP6P35125 AC023141.11-201ENST00000508864 202 ntBASIC2.11□□□□□ -2.07
USP6P35125 AC104136.1-201ENST00000512969 394 ntBASIC2.11□□□□□ -2.07
USP6P35125 AC010493.1-201ENST00000513479 292 ntBASIC2.11□□□□□ -2.07
USP6P35125 RNU5B-3P-201ENST00000516601 115 ntBASIC2.11□□□□□ -2.07
USP6P35125 RNU6-1178P-201ENST00000516674 107 ntBASIC2.11□□□□□ -2.07
USP6P35125 RPPH1-2P-201ENST00000516688 293 ntBASIC2.11□□□□□ -2.07
USP6P35125 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.11□□□□□ -2.07
USP6P35125 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.11□□□□□ -2.07
USP6P35125 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.11□□□□□ -2.07
USP6P35125 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.11□□□□□ -2.07
USP6P35125 AC008536.2-201ENST00000607284 349 ntBASIC2.11□□□□□ -2.07
USP6P35125 AC245008.1-201ENST00000608123 476 ntBASIC2.11□□□□□ -2.07
USP6P35125 AC007684.1-201ENST00000609671 477 ntBASIC2.11□□□□□ -2.07
USP6P35125 Z99129.1-201ENST00000612510 255 ntBASIC2.11□□□□□ -2.07
USP6P35125 AC005296.1-201ENST00000616145 209 ntBASIC2.11□□□□□ -2.07
USP6P35125 AC009090.3-201ENST00000616553 565 ntBASIC2.11□□□□□ -2.07
USP6P35125 AC092656.1-203ENST00000624134 423 ntBASIC2.11□□□□□ -2.07
USP6P35125 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
USP6P35125 MTND5P30-201ENST00000452896 1731 ntBASIC2.1□□□□□ -2.07
USP6P35125 Y_RNA.296-201ENST00000364930 108 ntBASIC2.1□□□□□ -2.07
USP6P35125 RNU6-1103P-201ENST00000384150 107 ntBASIC2.1□□□□□ -2.07
USP6P35125 RNU6-72P-201ENST00000384285 79 ntBASIC2.1□□□□□ -2.07
USP6P35125 RNU6-606P-201ENST00000384721 111 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms